Evidence map›Paper›PMID 32851205›Full record

ArticleBiomedical journal of scientific & technical research2020

Effect of serum on SmartFlare™ RNA Probes uptake and detection in cultured human cells.

Karolina Golab, Adam Krzystyniak, Paulina Langa, Michał Pikuła, Stefan Kunovac, Peter Borek, Piotr Trzonkowski, J Michael Millis, John Fung, Piotr Witkowski

Open access · diamondAbstract read
In one paragraph

Article in Biomedical journal of scientific & technical research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. SmartFlareWorld journal of stem cells · 2021
    Article
  4. RNA Flow Cytometry for the Study of T Cell Metabolism.International journal of molecular sciences · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Karolina GolabDepartment of Surgery, University of Chicago, Chicago, IL, USA.
Adam KrzystyniakDepartment of Surgery, University of Chicago, Chicago, IL, USA.
Paulina LangaDepartment of Clinical Immunology and Transplantology, Medical University of Gdansk, Gdansk, Poland.
Michał PikułaDepartment of Clinical Immunology and Transplantology, Medical University of Gdansk, Gdansk, Poland.
Stefan KunovacDepartment of Surgery, University of Chicago, Chicago, IL, USA.
Peter BorekDepartment of Surgery, University of Chicago, Chicago, IL, USA.
Piotr TrzonkowskiDepartment of Clinical Immunology and Transplantology, Medical University of Gdansk, Gdansk, Poland.
J Michael MillisDepartment of Surgery, University of Chicago, Chicago, IL, USA.
John FungDepartment of Surgery, University of Chicago, Chicago, IL, USA.
Piotr WitkowskiDepartment of Surgery, University of Chicago, Chicago, IL, USA.
University of Chicago · US

Funding

TRANSGENIC COREP60DK020595 · NIDDK · UNIVERSITY OF CHICAGO · PI BELL, GRAEME I · 1985 to 2012
$25.5M
Pilot and Feasibility ProgramP30DK020595 · NIDDK · UNIVERSITY OF CHICAGO · PI Matthew J Brady · 2013 to 2026
$20.9M
Re-Engineering Translational Research at the University of ChicagoUL1TR000430 · NCATS · UNIVERSITY OF CHICAGO · PI SOLWAY, JULIAN · 2012 to 2016
$20.2M
NCATS NIH HHS UL1 TR000430NIDDK NIH HHS P30 DK020595NIDDK NIH HHS P60 DK020595
6 · The paper itself

Abstract

SmartFlare™ RNA Detection Probes from Millipore is a novel technology to detect RNA in live cells based on the use of 12 nm gold nanoparticles coated with nucleotides. We proved that SmartFlares™ are internalized by human primary lymphocytes. However, fluorescence signals from target RNA detection can only be observed in the presence of Fetal Bovine Serum (FBS) in the medium, whereas it is not detectable without FBS or when medium is supplemented with human albumin. Image analysis of fluorescence generated from SmartFlare™ Uptake Control (gives constant signal regardless of contact with RNA) and RNA Specific Probes revealed further differences. In the presence of FBS, the fluorescence signal for both reagents was diffused within the cells, whereas in the absence of FBS, it was detected as single spots within the cells only when the Uptake Control was used. It is possible that FBS components are necessary for SmartFlare™ Probes to be released from cellular compartments into the cytoplasm where they can get into contact with target RNA. The exact mechanism of this phenomena should be further determined. However, for the first time, we present here that FBS in the cell culture medium is essential for RNA detection by SmartFlare™ technology in human lymphocytes.

Indexed as

cellular uptakegold nanoparticlesRNA detection in live cellsSmartFlares™

Identifiers

PMID32851205
PMCPMC7447198
OpenAlexW3081142738

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.