Evidence map›Paper›PMID 32850496›Full record

ArticleFrontiers in cellular and infection microbiology2020

A Novel Description of the Human Sinus Archaeome During Health and Chronic Rhinosinusitis.

Brett Wagner Mackenzie, Annie G West, David W Waite, Christian A Lux, Richard G Douglas, Michael W Taylor, Kristi Biswas

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 13 citations in OpenAlex.

  1. Pooled it
  2. [Advances in next-generation sequencing technology to analyze the microbiome of patients with chronic sinusitis].Lin chuang er bi yan hou tou jing wai ke za zhi = Journal of clinical otorhinolaryngology head and neck surgery · 2024
    Review
  3. Journal of oral microbiology · 2024
    Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. Meta-analyses on the Periodontal Archaeome.Advances in experimental medicine and biology · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Brett Wagner MackenzieDepartment of Surgery, The University of Auckland, Auckland, New Zealand.
Annie G WestSchool of Biological Sciences, The University of Auckland, Auckland, New Zealand.
David W WaiteSchool of Biological Sciences, The University of Auckland, Auckland, New Zealand.
Christian A LuxSchool of Biological Sciences, The University of Auckland, Auckland, New Zealand.
Richard G DouglasDepartment of Surgery, The University of Auckland, Auckland, New Zealand.
Michael W TaylorSchool of Biological Sciences, The University of Auckland, Auckland, New Zealand.
Kristi BiswasDepartment of Surgery, The University of Auckland, Auckland, New Zealand.
University of Auckland · NZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human microbiome studies remain focused on bacteria, as they comprise the dominant component of the microbiota. Recent advances in sequencing technology and optimization of amplicon sequencing protocols have allowed the description of other members of the microbiome, including eukaryotes (fungi) and, most recently, archaea. There are no known human-associated archaeal pathogens. Their diversity and contribution to health and chronic respiratory diseases, such as chronic rhinosinusitis (CRS), are unknown. Patients with CRS suffer from long-term sinus infections, and while the microbiota is hypothesized to play a role in its pathogenesis, the exact mechanism is poorly understood. In this cross-sectional study, we applied a recently optimized protocol to describe the prevalence, diversity and abundance of archaea in swab samples from the middle meatus of 60 individuals with and without CRS. A nested PCR approach was used to amplify the archaeal 16S rRNA gene for sequencing, and bacterial and archaeal load (also based on 16S rRNA genes) were estimated using Droplet Digital™ PCR (ddPCR). A total of 16 archaeal amplicon sequence variants (ASVs) from the phyla

Indexed as

MicrobiotaSinusitisArchaeaCross-Sectional StudiesHumansPhylogenyRNA, Ribosomal, 16SRNA, Ribosomal, 16S16S rRNA genearchaeabacteriachronic rhinosinusitisDroplet Digital™ PCRhuman microbiome

Identifiers

PMID32850496
PMCPMC7423975
OpenAlexW3048247429

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.