ArticleFrontiers in genetics2020
DNA N6-Methyladenine Modification in Wild and Cultivated Soybeans Reveals Different Patterns in Nucleus and Cytoplasm.
Article in Frontiers in genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
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Who cites it
9 citing papers in PubMed.
- 6 mA methylation differences in Riccia fluitans organellar genomes under flood stress.Plant cell reports · 2026Article
- Distribution patterns of N6-methyladenine in the rye genome.Scientific reports · 2025Article
- Advances in epigenetic studies of plant cadmium stress.Frontiers in plant science · 2024Review
- 6mA DNA Methylation on Genes in Plants Is Associated with Gene Complexity, Expression and Duplication.Plants (Basel, Switzerland) · 2023Article
- Beyond transcription factors: more regulatory layers affecting soybean gene expression under abiotic stress.Genetics and molecular biology · 2023Article
- Plant synthetic epigenomic engineering for crop improvement.Science China. Life sciences · 2022Review
- Distribution Pattern of N6-Methyladenine DNA Modification in the Seashore Paspalum (Frontiers in plant science · 2022Article
- Article
- Harnessing Current Knowledge of DNA N6-Methyladenosine From Model Plants for Non-model Crops.Frontiers in genetics · 2021Review
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Authors and funding
7 authors.
Funding
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Abstract
DNA 6mA modification, an important newly discovered epigenetic mark, plays a crucial role in organisms and has been attracting more and more attention in recent years. The soybean is economically the most important bean in the world, providing vegetable protein for millions of people. However, the distribution pattern and function of 6mA in soybean are still unknown. In this study, we decoded 6mA modification to single-nucleotide resolution in wild and cultivated soybeans, and compared the 6mA differences between cytoplasmic and nuclear genomes and between wild and cultivated soybeans. The motif of 6mA in the nuclear genome was conserved across the two kinds of soybeans, and ANHGA was the most dominant motif in wild and cultivated soybeans. Genes with 6mA modification in the nucleus had higher expression than those without modification. Interestingly, 6mA distribution patterns in cytoplasm for each soybean were significantly different from those in nucleus, which was reported for the first time in soybean. Our research provides a new insight in the deep analysis of cytoplasmic genomic DNA modification in plants.
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