Evidence map›Paper›PMID 32849731›Full record

ArticleFrontiers in plant science2020

Greenotyper: Image-Based Plant Phenotyping Using Distributed Computing and Deep Learning.

Marni Tausen, Marc Clausen, Sara Moeskjær, Asm Shihavuddin, Anders Bjorholm Dahl, Luc Janss, Stig Uggerhøj Andersen

Abstract read
In one paragraph

Article in Frontiers in plant science, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Review
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  9. Open Hardware in Science: The Benefits of Open Electronics.Integrative and comparative biology · 2022
    Review
  10. Review
  11. Article
  12. Major effect loci for plant size before onset of nitrogen fixation allow accurate prediction of yield in white clover.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  13. Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Marni TausenBioinformatics Research Centre, Aarhus University, Aarhus, Denmark.
Marc ClausenDepartment of Molecular Biology and Genetics, Aarhus University, Aarhus, Denmark.
Sara MoeskjærDepartment of Molecular Biology and Genetics, Aarhus University, Aarhus, Denmark.
Asm ShihavuddinImage Analysis & Computer Graphics, DTU Compute, Lyngby, Denmark.
Anders Bjorholm DahlImage Analysis & Computer Graphics, DTU Compute, Lyngby, Denmark.
Luc JanssDepartment of Molecular Biology and Genetics, Aarhus University, Aarhus, Denmark.
Stig Uggerhøj AndersenDepartment of Molecular Biology and Genetics, Aarhus University, Aarhus, Denmark.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Image-based phenotype data with high temporal resolution offers advantages over end-point measurements in plant quantitative genetics experiments, because growth dynamics can be assessed and analysed for genotype-phenotype association. Recently, network-based camera systems have been deployed as customizable, low-cost phenotyping solutions. Here, we implemented a large, automated image-capture system based on distributed computing using 180 networked Raspberry Pi units that could simultaneously monitor 1,800 white clover (

Indexed as

deep learninggreenness measuresimage detectionobject detectionplant phenotypingRaspberry Pisegmentationsoftware

Identifiers

PMID32849731
PMCPMC7427585

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.