Evidence map›Paper›PMID 32849601›Full record

ArticleFrontiers in immunology2020

Characterization of the Bronchoalveolar Lavage Fluid by Single Cell Gene Expression Analysis in Healthy Dogs: A Promising Technique.

Aline Fastrès, Dimitri Pirottin, Laurence Fievez, Thomas Marichal, Christophe J Desmet, Fabrice Bureau, Cécile Clercx

Open access · goldAbstract readComparative Study
In one paragraph

Article in Frontiers in immunology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Aline FastrèsDepartment of Clinical Sciences, Faculty of Veterinary Medicine, FARAH, University of Liège, Liège, Belgium.
Dimitri PirottinLaboratory of Cellular and Molecular Immunology, Department of Functional Sciences and GIGA-Inflammation, Infection and Immunity, University of Liège, Liège, Belgium.
Laurence FievezLaboratory of Cellular and Molecular Immunology, Department of Functional Sciences and GIGA-Inflammation, Infection and Immunity, University of Liège, Liège, Belgium.
Thomas MarichalLaboratory of Cellular and Molecular Immunology, Department of Functional Sciences and GIGA-Inflammation, Infection and Immunity, University of Liège, Liège, Belgium.
Christophe J DesmetLaboratory of Cellular and Molecular Immunology, Department of Functional Sciences and GIGA-Inflammation, Infection and Immunity, University of Liège, Liège, Belgium.
Fabrice BureauLaboratory of Cellular and Molecular Immunology, Department of Functional Sciences and GIGA-Inflammation, Infection and Immunity, University of Liège, Liège, Belgium.
Cécile ClercxDepartment of Clinical Sciences, Faculty of Veterinary Medicine, FARAH, University of Liège, Liège, Belgium.
University of Liège · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Single-cell mRNA-sequencing (scRNA-seq) is a technique which enables unbiased, high throughput and high-resolution transcriptomic analysis of the heterogeneity of cells within a population. This recent technique has been described in humans, mice and other species in various conditions to cluster cells in populations and identify new subpopulations, as well as to study the gene expression of cells in various tissues, conditions and origins. In dogs, a species for which markers of cell populations are often limiting, scRNA-seq presents with elevated yet untested potential for the study of tissue composition. As a proof of principle, we used scRNA-seq to identify cellular populations of the bronchoalveolar lavage fluid (BALF) in healthy dogs (

Indexed as

Gene Expression ProfilingRNA-SeqSingle-Cell AnalysisTranscriptomeAnimalsBronchoalveolar Lavage FluidCluster AnalysisDogsFemaleGenotypeLungPhenotypeProof of Concept StudyRNA, MessengerRNA, Messengerbronchoalveolar lavage fluidcelldoglungsingle-cell RNA-sequencing

Identifiers

PMID32849601
PMCPMC7406785
OpenAlexW3045679823

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.