Evidence map›Paper›PMID 32849456›Full record

ArticleFrontiers in microbiology2020

Evolutionary and Molecular Analysis of Complete Genome Sequences of Norovirus From Brazil: Emerging Recombinant Strain GII.P16/GII.4.

Juliana Merces Hernandez, Luciana Damascena Silva, Edivaldo Costa Sousa Junior, Jedson Ferreira Cardoso, Tammy Kathlyn Amaral Reymão, Ana Caroline Rodrigues Portela, Clayton Pereira Silva de Lima, Dielle Monteiro Teixeira, Maria Silvia Souza Lucena, Marcio Roberto Teixeira Nunes and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.3field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
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  3. Human norovirus in Brazil: an update of reports in different settings.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Juliana Merces HernandezPostgraduate Program in Biology of Infectious and Parasitic Agents, Institute of Biological Sciences, Federal University of Pará, Belém, Brazil.
Luciana Damascena SilvaVirology Section, Evandro Chagas Institute, Brazilian Ministry of Health, Ananindeua, Brazil.
Edivaldo Costa Sousa JuniorVirology Section, Evandro Chagas Institute, Brazilian Ministry of Health, Ananindeua, Brazil.
Jedson Ferreira CardosoCenter for Technological Innovation, Evandro Chagas Institute, Brazilian Ministry of Health, Ananindeua, Brazil.
Tammy Kathlyn Amaral ReymãoPostgraduate Program in Biology of Infectious and Parasitic Agents, Institute of Biological Sciences, Federal University of Pará, Belém, Brazil.
Ana Caroline Rodrigues PortelaVirology Section, Evandro Chagas Institute, Brazilian Ministry of Health, Ananindeua, Brazil.
Clayton Pereira Silva de LimaCenter for Technological Innovation, Evandro Chagas Institute, Brazilian Ministry of Health, Ananindeua, Brazil.
Dielle Monteiro TeixeiraVirology Section, Evandro Chagas Institute, Brazilian Ministry of Health, Ananindeua, Brazil.
Maria Silvia Souza LucenaVirology Section, Evandro Chagas Institute, Brazilian Ministry of Health, Ananindeua, Brazil.
Marcio Roberto Teixeira NunesCenter for Technological Innovation, Evandro Chagas Institute, Brazilian Ministry of Health, Ananindeua, Brazil.
Yvone Benchimol GabbayVirology Section, Evandro Chagas Institute, Brazilian Ministry of Health, Ananindeua, Brazil.
Ministério da Saúde · BRUniversidade Federal do Pará · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Noroviruses (NoVs) are enteric viruses that cause acute gastroenteritis, and the pandemic GII.4 genotype is spreading and evolving rapidly. The recombinant GII.P16/GII.4_Sydney strain emerged in 2016, replacing GII.P31/GII.4_Sydney (GII.P31 formerly known as GII.Pe) in some countries. We analyzed the complete genome of 20 NoV strains (17 GII.P31/GII.4_ Sydney and 3 GII.P16/GII.4_Sydney) from Belém and Manaus, Brazil, collected from 2012 to 2016. Phylogenetic trees were constructed by maximum likelihood method from 191 full NoV-VP1 sequences, demonstrated segregation of the Sydney lineage in two larger clades, suggesting that GII.4 strains associated with GII.P16 already have modifications compared with GII.P31/GII.4. Additionally, the Bayesian Markov Chain Monte Carlo method was used to reconstruct a time-scaled phylogenetic tree formed by GII.P16 ORF1 sequences (

Indexed as

complete genomeemergent recombinantgastroenteritisGII.P16/GII.4molecular evolutionnorovirus

Identifiers

PMID32849456
PMCPMC7423841
OpenAlexW3047603056

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.