Evidence map›Paper›PMID 32848019›Full record

ArticleThe Journal of biological chemistry2020

Biochemical insight into redox regulation of plastidial 3-phosphoglycerate dehydrogenase from

Keisuke Yoshida, Kinuka Ohtaka, Masami Yokota Hirai, Toru Hisabori

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Metabolism and Regulatory Functions ofFrontiers in plant science · 2021
    Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Keisuke YoshidaLaboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, Yokohama, Japan. Electronic address: yoshida.k.ao@m.titech.ac.jp.
Kinuka OhtakaRIKEN Center for Sustainable Resource Science, Yokohama, Japan; Department of Chemical and Biological Sciences, Faculty of Science, Japan Women's University, Tokyo, Japan.
Masami Yokota HiraiRIKEN Center for Sustainable Resource Science, Yokohama, Japan.
Toru HisaboriLaboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, Yokohama, Japan. Electronic address: thisabor@res.titech.ac.jp.
Tokyo Institute of Technology · JPJapan Women's University · JPRIKEN Center for Sustainable Resource Science · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Thiol-based redox regulation is a post-translational protein modification for controlling enzyme activity by switching oxidation/reduction states of Cys residues. In plant cells, numerous proteins involved in a wide range of biological systems have been suggested as the target of redox regulation; however, our knowledge on this issue is still incomplete. Here we report that 3-phosphoglycerate dehydrogenase (PGDH) is a novel redox-regulated protein. PGDH catalyzes the first committed step of Ser biosynthetic pathway in plastids. Using an affinity chromatography-based method, we found that PGDH physically interacts with thioredoxin (Trx), a key factor of redox regulation. The

Indexed as

ArabidopsisArabidopsis ProteinsDisulfidesElectrophoresis, Polyacrylamide GelEnzyme ActivationIsoenzymesMutagenesis, Site-DirectedOxidation-ReductionPhosphoglycerate DehydrogenasePlastidsProtein BindingThioredoxinsArabidopsis ProteinsDisulfidesIsoenzymesPhosphoglycerate DehydrogenaseThioredoxins3-phosphoglycerate dehydrogenaseArabidopsis thalianaplant biochemistryredox regulationthiolthioredoxin

Identifiers

PMID32848019
PMCPMC7606689
OpenAlexW3080564163

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.