Evidence map›Paper›PMID 32846159›Full record

ArticleCell2020

Thermus thermophilus Argonaute Functions in the Completion of DNA Replication.

Samson M Jolly, Ildar Gainetdinov, Karina Jouravleva, Han Zhang, Lara Strittmatter, Shannon M Bailey, Gregory M Hendricks, Avantika Dhabaria, Beatrix Ueberheide, Phillip D Zamore

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
12.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 126 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Samson M JollyDepartment of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA 01605, USA; Howard Hughes Medical Institute and RNA Therapeutics Institute, University of Massachusetts Medical School, Worcester, MA 01605, USA.
Ildar GainetdinovHoward Hughes Medical Institute and RNA Therapeutics Institute, University of Massachusetts Medical School, Worcester, MA 01605, USA.
Karina JouravlevaHoward Hughes Medical Institute and RNA Therapeutics Institute, University of Massachusetts Medical School, Worcester, MA 01605, USA.
Han ZhangHoward Hughes Medical Institute and RNA Therapeutics Institute, University of Massachusetts Medical School, Worcester, MA 01605, USA.
Lara StrittmatterDepartment of Radiology, Division of Cell Biology and Imaging, University of Massachusetts Medical School, Worcester, MA 01605, USA.
Shannon M BaileyHoward Hughes Medical Institute and RNA Therapeutics Institute, University of Massachusetts Medical School, Worcester, MA 01605, USA.
Gregory M HendricksDepartment of Radiology, Division of Cell Biology and Imaging, University of Massachusetts Medical School, Worcester, MA 01605, USA.
Avantika DhabariaProteomics Laboratory, Division of Advanced Research Technologies, New York University School of Medicine, New York, NY 10016, USA.
Beatrix UeberheideProteomics Laboratory, Division of Advanced Research Technologies, New York University School of Medicine, New York, NY 10016, USA; Department of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY 10016, USA; Center for Cognitive Neurology, Department of Neurology, New York University School of Medicine, New York, NY 10016, USA.
Phillip D ZamoreHoward Hughes Medical Institute and RNA Therapeutics Institute, University of Massachusetts Medical School, Worcester, MA 01605, USA. Electronic address: phillip.zamore@umassmed.edu.
Howard Hughes Medical Institute · USNew York University · USUniversity of Massachusetts Chan Medical School · US

Funding

Understanding the Mechanism of RNA InterferenceR37GM062862 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI ZAMORE, PHILLIP D · 2010 to 2019
$5.3M
Understanding the Evolution, Biology, and Molecular Mechanism of Argonaute ProteinsR35GM136275 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI PHILLIP D ZAMORE · 2020 to 2026
$3.3M
Transmission Electron Microscope for Core EM FacilityS10OD025113 · OD · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI HENDRICKS, GREGORY · 2018 to 2018
$600k
Scanning Electron Microscope for Core EM FacilityS10RR021043 · NCRR · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI CRAIG, ROGER W · 2007 to 2007
$498k
UltramicrotomeS10OD021580 · OD · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI HENDRICKS, GREGORY · 2016 to 2016
$53k
Howard Hughes Medical InstituteNCRR NIH HHS S10 RR021043NIGMS NIH HHS R35 GM136275NIGMS NIH HHS R37 GM062862NIH HHS S10 OD021580NIH HHS S10 OD025113
6 · The paper itself

Abstract

In many eukaryotes, Argonaute proteins, guided by short RNA sequences, defend cells against transposons and viruses. In the eubacterium Thermus thermophilus, the DNA-guided Argonaute TtAgo defends against transformation by DNA plasmids. Here, we report that TtAgo also participates in DNA replication. In vivo, TtAgo binds 15- to 18-nt DNA guides derived from the chromosomal region where replication terminates and associates with proteins known to act in DNA replication. When gyrase, the sole T. thermophilus type II topoisomerase, is inhibited, TtAgo allows the bacterium to finish replicating its circular genome. In contrast, loss of gyrase and TtAgo activity slows growth and produces long sausage-like filaments in which the individual bacteria are linked by DNA. Finally, wild-type T. thermophilus outcompetes an otherwise isogenic strain lacking TtAgo. We propose that the primary role of TtAgo is to help T. thermophilus disentangle the catenated circular chromosomes generated by DNA replication.

Indexed as

Argonaute ProteinsBacterial ProteinsCell SurvivalChromosomesCiprofloxacinDNADNA GyraseDNA ReplicationEndonucleasesMicroscopy, Electron, ScanningMicroscopy, Electron, TransmissionModels, MolecularRecombinant ProteinsRecombination, GeneticSingle Molecule ImagingTandem Mass SpectrometryArgonaute ProteinsBacterial ProteinsCiprofloxacinDNADNA GyraseEndonucleasesRecombinant ProteinsTopoisomerase II InhibitorsArgonautedecatenationDNA replicationgyrasepAGORNA silencingterminus of replicationThermus thermophilustopoisomeraseTtAgo

Identifiers

PMID32846159
PMCPMC7502556
OpenAlexW3080140042

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.