Evidence map›Paper›PMID 32845827›Full record

ArticleMicrobial genomics2020

Virulence genes and previously unexplored gene clusters in four commensal

Alan Calder, Chukwuma Jude Menkiti, Aylin Çağdaş, Jefferson Lisboa Santos, Ricarda Streich, Alice Wong, Amir H Avini, Ebrima Bojang, Karththeepan Yogamanoharan, Nivetha Sivanesan and 11 more

Open access · goldAbstract read
In one paragraph

Article in Microbial genomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 26 citations in OpenAlex.

  1. Trial
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  5. Improved Neisseria gonorrhoeae culture media without atmospheric COApplied microbiology and biotechnology · 2025
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  7. Characterisation and Immunogenicity ofFrontiers in immunology · 2024
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  9. Prevalence and Characterization ofInfection and drug resistance · 2023
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  11. Genomic Diversity and Chromosomal Rearrangements inInternational journal of molecular sciences · 2022
    Article
  12. Article
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  14. Frontiers in cellular and infection microbiology · 2022
    Review
  15. The Host-Pathogen Interactions and Epicellular Lifestyle ofFrontiers in cellular and infection microbiology · 2022
    Review
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 1 institution in 1 country.

Alan CalderSchool of Life Sciences, Pharmacy, and Chemistry, Kingston University, Kingston upon Thames, KT1 2EE, UK.
Chukwuma Jude MenkitiSchool of Life Sciences, Pharmacy, and Chemistry, Kingston University, Kingston upon Thames, KT1 2EE, UK.
Aylin ÇağdaşSchool of Life Sciences, Pharmacy, and Chemistry, Kingston University, Kingston upon Thames, KT1 2EE, UK.
Jefferson Lisboa SantosSchool of Life Sciences, Pharmacy, and Chemistry, Kingston University, Kingston upon Thames, KT1 2EE, UK.
Ricarda StreichSchool of Life Sciences, Pharmacy, and Chemistry, Kingston University, Kingston upon Thames, KT1 2EE, UK.
Alice WongSchool of Life Sciences, Pharmacy, and Chemistry, Kingston University, Kingston upon Thames, KT1 2EE, UK.
Amir H AviniSchool of Life Sciences, Pharmacy, and Chemistry, Kingston University, Kingston upon Thames, KT1 2EE, UK.
Ebrima BojangSchool of Life Sciences, Pharmacy, and Chemistry, Kingston University, Kingston upon Thames, KT1 2EE, UK.
Karththeepan YogamanoharanSchool of Life Sciences, Pharmacy, and Chemistry, Kingston University, Kingston upon Thames, KT1 2EE, UK.
Nivetha SivanesanSchool of Life Sciences, Pharmacy, and Chemistry, Kingston University, Kingston upon Thames, KT1 2EE, UK.
Besma AliSchool of Life Sciences, Pharmacy, and Chemistry, Kingston University, Kingston upon Thames, KT1 2EE, UK.
Mariam AshrafiSchool of Life Sciences, Pharmacy, and Chemistry, Kingston University, Kingston upon Thames, KT1 2EE, UK.
Abdirizak IssaSchool of Life Sciences, Pharmacy, and Chemistry, Kingston University, Kingston upon Thames, KT1 2EE, UK.
Tajinder KaurSchool of Life Sciences, Pharmacy, and Chemistry, Kingston University, Kingston upon Thames, KT1 2EE, UK.
Aisha LatifSchool of Life Sciences, Pharmacy, and Chemistry, Kingston University, Kingston upon Thames, KT1 2EE, UK.
Hani A Sheik MohamedSchool of Life Sciences, Pharmacy, and Chemistry, Kingston University, Kingston upon Thames, KT1 2EE, UK.
Atifa MaqsoodSchool of Life Sciences, Pharmacy, and Chemistry, Kingston University, Kingston upon Thames, KT1 2EE, UK.
Laxmi TamangSchool of Life Sciences, Pharmacy, and Chemistry, Kingston University, Kingston upon Thames, KT1 2EE, UK.
Emily SwagerSchool of Life Sciences, Pharmacy, and Chemistry, Kingston University, Kingston upon Thames, KT1 2EE, UK.
Alex J StringerSchool of Life Sciences, Pharmacy, and Chemistry, Kingston University, Kingston upon Thames, KT1 2EE, UK.
Lori A S SnyderSchool of Life Sciences, Pharmacy, and Chemistry, Kingston University, Kingston upon Thames, KT1 2EE, UK.
Kingston University · GB

Funding

Wellcome Trust
6 · The paper itself

Abstract

Commensal non-pathogenic

Indexed as

Bacterial ProteinsGene Transfer, HorizontalHealthy VolunteersHigh-Throughput Nucleotide SequencingHumansMultigene FamilyNeisseriaPharynxPhylogenySymbiosisType VI Secretion SystemsVirulence FactorsWhole Genome SequencingBacterial ProteinsType VI Secretion SystemsVirulence Factorsbacterial capsulenatural competence for transformationNeisseria cinereaNeisseria subflavaT6SS

Identifiers

PMID32845827
PMCPMC7643975
OpenAlexW3080109104

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.