Evidence map›Paper›PMID 32844358›Full record

ArticleGenes & genomics2020

High-throughput sequencing analysis of differences in intestinal microflora between ulcerative colitis patients with different glucocorticoid response types.

Yunzhen Zhu, Juan Luo, Zhaoqing Yang, Yinglei Miao

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Article in Genes & genomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. The Effect ofPolish journal of microbiology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Yunzhen ZhuDepartment of Gastroenterology, The First Affiliated Hospital of Kunming Medical University, 295 Xichang Road, Kunming, 650032, People's Republic of China.
Juan LuoDepartment of Gastroenterology, The First Affiliated Hospital of Kunming Medical University, 295 Xichang Road, Kunming, 650032, People's Republic of China.
Zhaoqing YangDepartment of Pathogen Biology and Immunology, Kunming Medical University, 1168 West Chunrong Road, Yuhua Avenue, Kunming, 650500, People's Republic of China. Zhaoqingy92@hotmail.com.ORCID 0000-0002-8014-1561
Yinglei MiaoDepartment of Gastroenterology, The First Affiliated Hospital of Kunming Medical University, 295 Xichang Road, Kunming, 650032, People's Republic of China. myldu@sina.com.
Kunming Medical University · CN

Funding

Applied Basic Research Key Projects of Yunnan Province 2016FA033Digestive Diseases S&T Innovation Team of Kunming Medical University CXTD201611Foundation of Yunnan Institute of Digestive Disease 2016NS002Major science and technology projects of Yunnan Province 2018ZF0081MDT Innovation Team to Digestive Diseases of S&T Department of Yunnan Province 2017HC005Medicine Leading Talent of Health and Family Planning Commission of Yunnan Province L-201607National Natural Science Foundation of China 81660100National Natural Science Foundation of China 81670501National Natural Science Foundation of China U1802282National Natural Science Foundation of China U1802286the National Science Foundation of China 31860604
6 · The paper itself

Abstract

backgroundPrevious investigations reported that the imbalance of intestinal microflora may be the initiation and promotion factor in the pathogenesis of inflammatory bowel disease such as ulcerative colitis (UC). Glucocorticoid is a very important class of regulatory molecules in the body. The response of different individuals to glucocorticoids can be divided into glucocorticoid sensitive, glucocorticoid resistance and glucocorticoid dependence.

objectiveWe aimed to investigate the differences in intestinal microflora composition and related metabolic pathways in UC patients with these three different glucocorticoid response types.

methodsThe whole genomic DNA was extracted from fecal specimens. High-throughput sequencing technology was used to analyze the fecal 16S rRNA genome of UC patients with different glucocorticoid response types, and functional prediction was performed by PICRUSTs software.

resultsThe results showed that the intestinal microflora of the three groups were mainly composed of Firmicutes, Proteobacteria and Bacteroidetes. Although the species abundance and diversity of intestinal microflora in UC patients differed little among the three groups, the composition of intestinal microflora showed significant heterogeneity, which directly led to differences in the function of intestinal microbiota of UC patients with different glucocorticoid responses. Furthermore, of the 240 pathways, "PANTO-PWY: phosphopantothenate biosynthesis I", "COA-PWY-1: coenzyme A biosynthesis II (mammalian)" and "PWY-4242: pantothenate and coenzyme A biosynthesis III" were significantly different in the three groups.

conclusionsThese results indicate that UC patients with different glucocorticoids response types have different bacterial compositions and functions, which lays a foundation for further study of glucocorticoid resistance in UC patients.

Indexed as

AdultAgedColitis, UlcerativeFemaleGastrointestinal MicrobiomeGlucocorticoidsHigh-Throughput Nucleotide SequencingHumansIntestinesMaleMetabolism, Inborn ErrorsMiddle AgedReceptors, GlucocorticoidRNA, Ribosomal, 16SSignal TransductionGlucocorticoidsReceptors, GlucocorticoidRNA, Ribosomal, 16SGlucocorticoidHigh-throughput sequencingIntestinal microorganismUlcerative colitis

Identifiers

PMID32844358
OpenAlexW3080901502

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.