ArticleBiotechnology for biofuels2020
Integrative transcriptome and proteome analyses provide new insights into different stages of
Article in Biotechnology for biofuels, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
28 citing papers in PubMed, 45 citations in OpenAlex.
- Tandem mass tag-based serum proteomic profiling revealed diabetic foot ulcer pathogenesis and potential therapeutic targets.Bioengineered · 2022Trial
- Optimization of Sensory Quality and Short-Term Colloidal Stability ofFoods (Basel, Switzerland) · 2026Article
- Genetic control of tomato fruit cracking through SlPMEI27-dependent pectin modification.Molecular horticulture · 2026Article
- Genome-wide identification of eQTL-associated lncRNAs in melon and their role in fruit cracking.Scientific reports · 2026Article
- Regulatory effects of exogenous calcium on sweet cherry fruit cracking and functional analysis of theFrontiers in plant science · 2026Article
- Cr3a, a candidate gene conferring fruit cracking resistance, was fine-mapped in an introgression line of Solanum lycopersicum L.The Plant journal : for cell and molecular biology · 2025Article
- Article
- Genome-wide analysis of AP2/ERF family inFrontiers in plant science · 2025Article
- Global analysis of transcription factors using both the reference genome and the multi-transcriptome ofFrontiers in plant science · 2025Article
- Deciphering the Genetic and Biochemical Drivers of Fruit Cracking inInternational journal of molecular sciences · 2024Article
- Unravelling the molecular regulation network of carbon metabolism and lipid metabolism during seed development in Akebia trifoliata via integrated multi-omics analysis.Scientific reports · 2024Article
- Conservative mechanism through various rapeseed (Frontiers in plant science · 2024Article
- Genome-Wide Analysis of the Polygalacturonase Gene Family Sheds Light on the Characteristics, Evolutionary History, and Putative Function ofInternational journal of molecular sciences · 2023Article
- Integrative Metabolomic and Transcriptomic Landscape duringInternational journal of molecular sciences · 2023Article
- Germplasm resources and genetic improvement ofPlant diversity · 2023Review
- Genome-Wide Identification of the CDPK Gene Family and Their Involvement in Taproot Cracking in Radish.International journal of molecular sciences · 2023Article
- Transcriptomic Time-Course Sequencing: Insights into the Cell Wall Macromolecule-Mediated Fruit Dehiscence during Ripening inPlants (Basel, Switzerland) · 2023Article
- Identification of Protein Quality Markers in Toad Venom fromMolecules (Basel, Switzerland) · 2023Article
- Genome-Wide Identification of Superoxide Dismutase and Expression in Response to Fruit Development and Biological Stress inAntioxidants (Basel, Switzerland) · 2023Article
- Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
8 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
background
resultsIn this study, by observing the cell wall structure of the pericarp, we found that the cell wall became thinner and looser and showed substantial breakdown in the pericarp of cracking fruit compared with that in non-cracking fruit. Moreover, integrative analyses of transcriptome and proteome profiles at different stages of fruit ripening demonstrated changes in the expression of various genes and proteins after cracking. Furthermore, the mRNA levels of 20 differentially expressed genes were analyzed, and parallel reaction monitoring analysis of 20 differentially expressed proteins involved in cell wall metabolism was conducted. Among the molecular targets, pectate lyases and pectinesterase, which are involved in pentose and glucuronate interconversion, and β-galactosidase 2, which is involved in galactose metabolism, were significantly upregulated in cracking fruits than in non-cracking fruits. This suggested that they might play crucial roles in
conclusionsOur findings provided new insights into potential genes influencing the fruit cracking trait in
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.