Evidence map›Paper›PMID 32843548›Full record

ArticlemBio2020

Cooperation, Competition, and Specialized Metabolism in a Simplified Root Nodule Microbiome.

Bridget L Hansen, Rita de Cassia Pessotti, Monika S Fischer, Alyssa Collins, Laila El-Hifnawi, Mira D Liu, Matthew F Traxler

Abstract read
In one paragraph

Article in mBio, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Comparative Genomic Analysis ofMicroorganisms · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Cyclic Isothiocyanate Goitrin ImpairsPlants (Basel, Switzerland) · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Investigation of the potential ofFrontiers in microbiology · 2023
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Bridget L HansenDepartment of Plant and Microbial Biology, University of California, Berkeley, Berkeley, California, USA.ORCID 0000-0001-5507-7169
Rita de Cassia PessottiDepartment of Plant and Microbial Biology, University of California, Berkeley, Berkeley, California, USA.ORCID 0000-0003-0805-8613
Monika S FischerDepartment of Plant and Microbial Biology, University of California, Berkeley, Berkeley, California, USA.ORCID 0000-0001-5671-5572
Alyssa CollinsDepartment of Molecular and Cellular Biology, University of California, Berkeley, Berkeley, California, USA.
Laila El-HifnawiDepartment of Molecular and Cellular Biology, University of California, Berkeley, Berkeley, California, USA.
Mira D LiuDepartment of Chemistry, University of California, Berkeley, Berkeley, California, USA.ORCID 0000-0002-4412-7770
Matthew F TraxlerDepartment of Plant and Microbial Biology, University of California, Berkeley, Berkeley, California, USA mtrax@berkeley.edu.ORCID 0000-0001-8430-595X

Funding

Connecting specialized metabolism to social cues in actinomycete bacteriaR35GM128849 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI Matthew F Traxler · 2018 to 2026
$3.3M
NIGMS NIH HHS R35 GM128849
6 · The paper itself

Abstract

Microbiomes associated with various plant structures often contain members with the potential to make specialized metabolites, e.g., molecules with antibacterial, antifungal, or siderophore activities. However, when and where microbes associated with plants produce specialized metabolites, and the potential role of these molecules in mediating intramicrobiome interactions, is not well understood. Root nodules of legume plants are organs devoted to hosting symbiotic bacteria that fix atmospheric nitrogen and have recently been shown to harbor a relatively simple accessory microbiome containing members with the ability to produce specialized metabolites

Indexed as

Microbial InteractionsMicrobiotaBacteriaBrevibacillusMedicago sativaNitrogenNitrogen FixationRoot Nodules, PlantSymbiosisNitrogenantibioticmicrobial interactionsmicrobiomeroot nodulespecialized metabolism

Identifiers

PMID32843548
PMCPMC7448283

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.