Evidence map›Paper›PMID 32843521›Full record

ArticleG3 (Bethesda, Md.)2020

A Chromosome-Scale Genome Assembly for the

Like Fokkens, Li Guo, Susanne Dora, Bo Wang, Kai Ye, Clara Sánchez-Rodríguez, Daniel Croll

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Fusarium Genome Sequencing and Assembly.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  5. Article
  6. FoPGDB: a pangenome database of Fusarium oxysporum, a cross-kingdom fungal pathogen.Database : the journal of biological databases and curation · 2024
    Article
  7. Article
  8. Article
  9. Pangenomics of flax fungal parasiteFrontiers in plant science · 2024
    Article
  10. Review
  11. Article
  12. Conservation and Expansion of Transcriptional Factor Repertoire in thebioRxiv : the preprint server for biology · 2023
    Article
  13. Article
  14. Review
  15. Insights on KP4 Killer Toxin-like Proteins ofJournal of fungi (Basel, Switzerland) · 2022
    Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Metatranscriptomic Comparison of Endophytic and PathogenicMolecular plant-microbe interactions : MPMI · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Like FokkensMolecular Plant Pathology, University of Amsterdam, The Netherlands.ORCID 0000-0001-6696-4409
Li GuoMOE Key Laboratory for Intelligent Networks & Network Security, Faculty of Electronic and Information Engineering, Xi'an Jiaotong University, Xi'an, China.ORCID 0000-0001-6100-3481
Susanne DoraDepartment of Biology, ETH Zurich, Zurich, Switzerland.
Bo WangMOE Key Laboratory for Intelligent Networks & Network Security, Faculty of Electronic and Information Engineering, Xi'an Jiaotong University, Xi'an, China.ORCID 0000-0002-9041-878X
Kai YeMOE Key Laboratory for Intelligent Networks & Network Security, Faculty of Electronic and Information Engineering, Xi'an Jiaotong University, Xi'an, China kaiye@xjtu.edu.cn clara_sanchez@ethz.ch daniel.croll@unine.ch.ORCID 0000-0002-2851-6741
Clara Sánchez-RodríguezDepartment of Biology, ETH Zurich, Zurich, Switzerland kaiye@xjtu.edu.cn clara_sanchez@ethz.ch daniel.croll@unine.ch.
Daniel CrollLaboratory of Evolutionary Genetics, Institute of Biology, University of Neuchâtel, Neuchâtel, Switzerland kaiye@xjtu.edu.cn clara_sanchez@ethz.ch daniel.croll@unine.ch.ORCID 0000-0002-2072-380X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant pathogens cause widespread yield losses in agriculture. Understanding the drivers of plant-pathogen interactions requires decoding the molecular dialog leading to either resistance or disease. However, progress in deciphering pathogenicity genes has been severely hampered by suitable model systems and incomplete fungal genome assemblies. Here, we report a significant improvement of the assembly and annotation of the genome of the

Indexed as

ArabidopsisFusariumChromosomesGenome, FungalPlant DiseasesArabidopsis thalianacomparative genomicsFusarium oxysporumgenome assemblyinfection assaystransposable elements

Identifiers

PMID32843521
PMCPMC7534451

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.