Evidence map›Paper›PMID 32842138›Full record

ArticlePloS one2020

Hidden diversity in Prochilodus nigricans: A new genetic lineage within the Tapajós River basin.

Ueslei Lopes, Pedro M Galetti, Patricia Domingues de Freitas

Abstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Ueslei LopesDepartamento de Genética e Evolução, Universidade Federal de São Carlos, São Carlos, SP, Brazil.ORCID 0000-0002-8767-9399
Pedro M GalettiDepartamento de Genética e Evolução, Universidade Federal de São Carlos, São Carlos, SP, Brazil.
Patricia Domingues de FreitasDepartamento de Genética e Evolução, Universidade Federal de São Carlos, São Carlos, SP, Brazil.ORCID 0000-0002-0309-2815

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Highly spread through the Amazon River basin, Prochilodus nigricans have had its taxonomic validity recently questioned, when genetic differences between Western and Eastern Amazon populations from the Brazilian shield were detected. This area has been seeing as a region of high ichthyofaunal diversity and endemism, in which the hybrid origin of the Tapajós River basin has been raised. In this paper, we report a new molecular lineage within P. nigricans of Tapajós River, highlighting this region still hides taxonomically significant diversity. Haplotype networks were reconstructed using the mitochondrial COI and ATP6/8 markers, which were also used to calculate genetic distances among clusters. We additionally conducted a delimiting species approach by employing a Generalized Mixed Yule-Coalescent model (GMYC) with COI sequences produced here, and previous ones published for individuals sampled across the Amazon River basin. In addition to the genetic differentiation within P. nigricans, our findings favor the hypothesis of hybrid origin of the Tapajós River basin and reaffirm the importance of studies aiming to investigate hidden diversity to address taxonomic and biogeographic issues, that certainly benefit better biodiversity conservation actions.

Indexed as

BiodiversityPhylogenyRiversAnimalsBayes TheoremBrazilCharaciformesGeographyHaplotypes

Identifiers

PMID32842138
PMCPMC7447553

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.