Evidence map›Paper›PMID 32841424›Full record

ArticlePediatric allergy and immunology : official publication of the European Society of Pediatric Allergy and Immunology2021

Genome-wide association study reveals a novel locus for asthma with severe exacerbations in diverse populations.

Esther Herrera-Luis, Antonio Espuela-Ortiz, Fabian Lorenzo-Diaz, Kevin L Keys, Angel C Y Mak, Celeste Eng, Scott Huntsman, Jesús Villar, Jose R Rodriguez-Santana, Esteban G Burchard and 1 more

Open access · greenAbstract read
In one paragraph

Article in Pediatric allergy and immunology : official publication of the European Society of Pediatric Allergy and Immunology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 2 pooled it
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 2 syntheses or guidelines pooled it, 28 citations in OpenAlex.

  1. Pooled it
  2. Multi-ancestry genome-wide association study of asthma exacerbations.Pediatric allergy and immunology : official publication of the European Society of Pediatric Allergy and Immunology · 2022
    Pooled it
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Asthma-Genomic Advances Toward Risk Prediction.Clinics in chest medicine · 2024
    Review
  10. Genetics of chronic respiratory disease.Nature reviews. Genetics · 2024
    Review
  11. Review
  12. Article
  13. Asthma Exacerbations: The Genes Behind the Scenes.Journal of investigational allergology & clinical immunology · 2023
    Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 4 countries.

Esther Herrera-LuisGenomics and Health Group, Department of Biochemistry, Microbiology, Cell Biology and Genetics, Universidad de La Laguna, San Cristóbal de La Laguna, Tenerife, Spain.ORCID 0000-0003-4150-5454
Antonio Espuela-OrtizGenomics and Health Group, Department of Biochemistry, Microbiology, Cell Biology and Genetics, Universidad de La Laguna, San Cristóbal de La Laguna, Tenerife, Spain.ORCID 0000-0003-0572-9549
Fabian Lorenzo-DiazGenomics and Health Group, Department of Biochemistry, Microbiology, Cell Biology and Genetics, Universidad de La Laguna, San Cristóbal de La Laguna, Tenerife, Spain.ORCID 0000-0002-3398-198X
Kevin L KeysDepartment of Medicine, University of California San Francisco, San Francisco, CA, USA.ORCID 0000-0003-4886-6666
Angel C Y MakDepartment of Medicine, University of California San Francisco, San Francisco, CA, USA.ORCID 0000-0002-5372-4198
Celeste EngDepartment of Medicine, University of California San Francisco, San Francisco, CA, USA.
Scott HuntsmanDepartment of Medicine, University of California San Francisco, San Francisco, CA, USA.
Jesús VillarCIBER de Enfermedades Respiratorias, Instituto de Salud Carlos III, Madrid, Spain.ORCID 0000-0001-5687-3562
Jose R Rodriguez-SantanaCentro de Neumología Pediátrica, San Juan, Puerto Rico.
Esteban G BurchardDepartment of Medicine, University of California San Francisco, San Francisco, CA, USA.ORCID 0000-0001-7475-2035
Maria Pino-YanesGenomics and Health Group, Department of Biochemistry, Microbiology, Cell Biology and Genetics, Universidad de La Laguna, San Cristóbal de La Laguna, Tenerife, Spain.ORCID 0000-0003-0332-437X
University of California, San Francisco · USUniversidad de La Laguna · ESCentro de Neumologia Pediatrica · PRSt. Michael's Hospital · CA

Funding

Clinical and Translational Science InstituteUL1TR001872 · NCATS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI COLLARD, HAROLD R, JACOBY, VANESSA · 2016 to 2025
$112.1M
UCSF IRACDA Scholars ProgramK12GM081266 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Raymond M. Esquerra, HOLLY A. INGRAHAM · 2007 to 2026
$19.4M
The Airway Functional Genomics of Bronchodilator Drug Response in Minority Children with AsthmaR01HL117004 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI AHITUV, NADAV, SEIBOLD, MAX A · 2013 to 2022
$9.3M
Social Interventions to address disparities In young adult tobacco useP60MD006902 · NIMHD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HIATT, ROBERT A · 2012 to 2016
$6.4M
Gene-environments and Admixture in Latino Asthmatics (GALA 2)R01ES015794 · NIEHS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BURCHARD, ESTEBAN GONZALEZ · 2008 to 2012
$5.4M
SF BUILD: Enabling Students to Represent in ScienceRL5GM118984 · NIGMS · SAN FRANCISCO STATE UNIVERSITY · PI MARQUEZ-MAGANA, LETICIA MARIA, MORRIS, MEGHAN D · 2015 to 2023
$5.2M
Optimizing imputation for diverse populations in a distributed frameworkU01HG009080 · NHGRI · STANFORD UNIVERSITY · PI KENNY, EIMEAR ELIZABETH · 2016 to 2020
$5.2M
Transcriptomic and Pharmacogenetic Asthma Endotypes in Minority ChildrenR01HL135156 · NHLBI · NATIONAL JEWISH HEALTH · PI SEIBOLD, MAX A, ZIV, ELAD · 2017 to 2021
$4.1M
Genes, air pollution, and asthma severity in minority childrenR01MD010443 · NIMHD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SEIBOLD, MAX A, ZIV, ELAD · 2016 to 2020
$3.8M
Leveraging electronic medical records to perform large-scale diabetes pharmacogenomics among ancestrally diverse patient populationsR01DK113003 · NIDDK · HENRY FORD HEALTH SYSTEM · PI WILLIAMS, KEOKI · 2017 to 2021
$3.2M
Genetic Control of Airway Epithelium Gene Expression in Childhood AsthmaticsR01HL128439 · NHLBI · NATIONAL JEWISH HEALTH · PI SEIBOLD, MAX A · 2015 to 2019
$3.1M
Poly-omic Study of Asthma Exacerbations in Diverse PopulationsR01HL141845 · NHLBI · HENRY FORD HEALTH SYSTEM · PI WILLIAMS, KEOKI · 2019 to 2022
$3.0M
NCATS NIH HHS UL1 TR001872NHGRI NIH HHS U01 HG009080NHGRI NIH HHS U01HG009080NHLBI NIH HHS R01 HL117004NHLBI NIH HHS R01HL117004NHLBI NIH HHS R01 HL128439NHLBI NIH HHS R01HL128439NHLBI NIH HHS R01 HL135156NHLBI NIH HHS R01HL135156NHLBI NIH HHS R01HL135156-S1NHLBI NIH HHS R01 HL141845NHLBI NIH HHS R01HL141845NHLBI NIH HHS R01 HL141992NHLBI NIH HHS R01HL141992NHLBI NIH HHS X01HL134589NIDDK NIH HHS R01 DK113003NIEHS NIH HHS R01 ES015794NIEHS NIH HHS R01ES015794NIEHS NIH HHS R21 ES024844NIEHS NIH HHS R21ES24844NIGMS NIH HHS K12 GM081266NIGMS NIH HHS RL5 GM118984NIGMS NIH HHS RL5GM118984NIMHD NIH HHS P60 MD006902NIMHD NIH HHS P60MD006902NIMHD NIH HHS R01 MD010443NIMHD NIH HHS R01MD010443NIMHD NIH HHS R56 MD013312NIMHD NIH HHS R56MD013312
6 · The paper itself

Abstract

backgroundSevere asthma exacerbations are a major cause of asthma morbidity and increased healthcare costs. Several studies have shown racial and ethnic differences in asthma exacerbation rates. We aimed to identify genetic variants associated with severe exacerbations in two high-risk populations for asthma.

methodsA genome-wide association study of asthma in children and youth with severe exacerbations was performed in 1283 exacerbators and 2027 controls without asthma of Latino ancestry. Independent suggestive variants (P ≤ 5 × 10

resultsWe identified two genome-wide significant associations for susceptibility to asthma with severe exacerbations, including a novel locus located at chromosome 2p21 (rs4952375, odds ratio = 1.39, P = 3.8 × 10

conclusionWe identified a novel susceptibility locus for severe asthma exacerbations in Hispanic/Latino and African American youths with functional effects in gene expression and methylation status of neighboring genes.

Indexed as

AsthmaGenome-Wide Association StudyAdolescentBlack or African AmericanGenetic Predisposition to DiseaseHispanic or LatinoHumansPolymorphism, Single NucleotideAfrican Americanasthmaethnic differencesexacerbationsgene expressiongenome-wide association studyHispanicLatinomethylationsingle nucleotide polymorphismsusceptibility

Identifiers

PMID32841424
PMCPMC7886969
OpenAlexW3080974142

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.