Evidence map›Paper›PMID 32840801›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2021

High-Throughput Analysis of Heteroduplex DNA in Mitotic Recombination Products.

Dionna Gamble, Yee Fang Hum, Sue Jinks-Robertson

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Dionna GambleDepartment of Molecular Genetics and Microbiology, Duke University, Durham, NC, USA.
Yee Fang HumDepartment of Cancer Biology, Abramson Family Cancer Research Institute Basser Center for BRCA, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Sue Jinks-RobertsonDepartment of Molecular Genetics and Microbiology, Duke University, Durham, NC, USA. sue.robertson@duke.edu.

Funding

Regulation of mitotic genome stability in yeast.R35GM118077 · NIGMS · DUKE UNIVERSITY · PI JINKS-ROBERTSON, SUE · 2016 to 2023
$4.5M
Genetics and Genomics Training GrantT32GM136627 · NIGMS · DUKE UNIVERSITY · PI ALLISON E ASHLEY-KOCH · 2020 to 2026
$3.1M
NIGMS NIH HHS R35 GM118077NIGMS NIH HHS T32 GM136627
6 · The paper itself

Abstract

Mitotic double-strand breaks (DSBs) are repaired by recombination with a homologous donor duplex. This process involves the exchange of single DNA strands between the broken molecule and the repair template, giving rise to regions of heteroduplex DNA (hetDNA). The creation of a defined DSB coupled with the use of a sequence-diverged repair template allows the fine-structure mapping of hetDNA through the sequencing of recombination products. A high-throughput method is described that capitalizes on the single-molecule real-time (SMRT) sequencing technology developed by PacBio. This method allows simultaneous analysis of the hetDNA contained within hundreds of recombination products.

Indexed as

DNA Breaks, Double-StrandedDNA, FungalGene ConversionHigh-Throughput Nucleotide SequencingMitosisSaccharomyces cerevisiaeSingle Molecule ImagingDNA, FungalDouble-strand breakGene conversionhetDNAPacBioRecombinationSMRTYeast

Identifiers

PMID32840801
PMCPMC8335798

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.