Evidence map›Paper›PMID 32839537›Full record

ArticleNature microbiology2020

Influenza virus repurposes the antiviral protein IFIT2 to promote translation of viral mRNAs.

Vy Tran, Mitchell P Ledwith, Thiprampai Thamamongood, Christina A Higgins, Shashank Tripathi, Max W Chang, Christopher Benner, Adolfo García-Sastre, Martin Schwemmle, Adrianus C M Boon and 2 more

Open access · greenAbstract read
In one paragraph

Article in Nature microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed, 1 pooled it
3.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed, 1 synthesis or guideline pooled it, 86 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
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  5. Article
  6. Review
  7. Article
  8. Article
  9. Intrinsic OASL expression governs heterogeneity in interferon induction during influenza A virus infection.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  10. Review
  11. The ribosomal landscape in influenza A virus infection: from molecular mechanisms to clinical relevance.European respiratory review : an official journal of the European Respiratory Society · 2026
    Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
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  19. Article
  20. Article

11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Vy Tran *Medical Microbiology and Immunology, University of Wisconsin Madison, Madison, WI, USA.
Mitchell P Ledwith *Medical Microbiology and Immunology, University of Wisconsin Madison, Madison, WI, USA.
Thiprampai ThamamongoodInstitute of Virology, Medical Center, University of Freiburg, Freiburg, Germany.ORCID http://orcid.org/0000-0001-9824-6639
Christina A HigginsMedical Microbiology and Immunology, University of Wisconsin Madison, Madison, WI, USA.
Shashank TripathiDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Max W ChangDepartment of Medicine, University of California, San Diego, San Diego, CA, USA.
Christopher BennerDepartment of Medicine, University of California, San Diego, San Diego, CA, USA.ORCID http://orcid.org/0000-0002-4618-0719
Adolfo García-SastreDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0002-6551-1827
Martin SchwemmleInstitute of Virology, Medical Center, University of Freiburg, Freiburg, Germany.ORCID http://orcid.org/0000-0002-2972-6855
Adrianus C M BoonDepartments of Medicine, Molecular Microbiology, and Pathology & Immunology, Washington University School of Medicine, St. Louis, MO, USA.
Michael S DiamondDepartments of Medicine, Molecular Microbiology, and Pathology & Immunology, Washington University School of Medicine, St. Louis, MO, USA.ORCID http://orcid.org/0000-0002-8791-3165
Andrew MehleMedical Microbiology and Immunology, University of Wisconsin Madison, Madison, WI, USA. amehle@wisc.edu.ORCID http://orcid.org/0000-0001-6060-4330
University of Wisconsin–Madison · USIcahn School of Medicine at Mount Sinai · USUniversity of California San Diego · USUniversity of Freiburg · DEWashington University in St. Louis · US

Funding

SARS-CoV adaptations through a Systems Biology Lens (SYBIL)U19AI135972 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Adolfo Garcia-Sastre · 2018 to 2026
$27.2M
Virus CoreU19AI106754 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI DENNIS, EDWARD A · 2013 to 2017
$26.0M
GRADUATE TRAINING IN MOLECULAR BIOSCIENCEST32GM007215 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI HULL, CHRISTINA M · 1985 to 2018
$22.5M
ISG CONTROL OF FLAVIVIRUS INFECTIONR01AI104972 · NIAID · WASHINGTON UNIVERSITY · PI CHANDA, SUMIT K, DIAMOND, MICHAEL S · 2013 to 2017
$3.0M
Regulation of the influenza virus polymeraseR01AI125271 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI MEHLE, ANDREW · 2016 to 2020
$1.9M
The Role of IFI35 in Innate Immunity and Influenza PathogenesisR01AI118938 · NIAID · WASHINGTON UNIVERSITY · PI BOON, ADRIANUS CM · 2016 to 2020
$1.9M
Identifying host factors and the mechanisms used to control influenza virus replicationR21AI125897 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI MEHLE, ANDREW · 2016 to 2017
$425k
NIAID NIH HHS HHSN272201400008CNIAID NIH HHS R01 AI104972NIAID NIH HHS R01 AI118938NIAID NIH HHS R01 AI125271NIAID NIH HHS R21 AI125897NIAID NIH HHS U19 AI106754NIAID NIH HHS U19 AI135972NIGMS NIH HHS T32 GM007215
6 · The paper itself

Abstract

Cells infected by influenza virus mount a large-scale antiviral response and most cells ultimately initiate cell-death pathways in an attempt to suppress viral replication. We performed a CRISPR-Cas9-knockout selection designed to identify host factors required for replication after viral entry. We identified a large class of presumptive antiviral factors that unexpectedly act as important proviral enhancers during influenza virus infection. One of these, IFIT2, is an interferon-stimulated gene with well-established antiviral activity but limited mechanistic understanding. As opposed to suppressing infection, we show in the present study that IFIT2 is instead repurposed by influenza virus to promote viral gene expression. CLIP-seq demonstrated that IFIT2 binds directly to viral and cellular messenger RNAs in AU-rich regions, with bound cellular transcripts enriched in interferon-stimulated mRNAs. Polysome and ribosome profiling revealed that IFIT2 prevents ribosome pausing on bound mRNAs. Together, the data link IFIT2 binding to enhanced translational efficiency for viral and cellular mRNAs and ultimately viral replication. Our findings establish a model for the normal function of IFIT2 as a protein that increases translation of cellular mRNAs to support antiviral responses and explain how influenza virus uses this same activity to redirect a classically antiviral protein into a proviral effector.

Indexed as

Protein BiosynthesisAnimalsApoptosis Regulatory ProteinsCell LineHost-Pathogen InteractionsHumansInfluenza A virusInfluenza, HumanMiceMice, KnockoutRNA-Binding ProteinsRNA, MessengerRNA, ViralVirus ReplicationApoptosis Regulatory ProteinsIFIT2 protein, humanIfit2 protein, mouseRNA-Binding ProteinsRNA, MessengerRNA, Viral

Identifiers

PMID32839537
PMCPMC7677226
OpenAlexW3080833293

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.