Evidence map›Paper›PMID 32839531›Full record

ArticleScientific reports2020

Integrated proteomics and metabolomics reveals the comprehensive characterization of antitumor mechanism underlying Shikonin on colon cancer patient-derived xenograft model.

Yang Chen, Juan Ni, Yun Gao, Jinghui Zhang, Xuesong Liu, Yong Chen, Zhongjian Chen, Yongjiang Wu

Abstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yang ChenCollege of Pharmaceutical Sciences, Zhejiang University, Hangzhou, 310058, China.
Juan NiInstitute of Cancer and Basic Medicine (ICBM), Chinese Academy of Sciences, Zhejiang Province, Hangzhou, 310022, China.
Yun GaoInstitute of Cancer and Basic Medicine (ICBM), Chinese Academy of Sciences, Zhejiang Province, Hangzhou, 310022, China.
Jinghui ZhangCollege of Pharmaceutical Sciences, Zhejiang University, Hangzhou, 310058, China.
Xuesong LiuCollege of Pharmaceutical Sciences, Zhejiang University, Hangzhou, 310058, China.
Yong ChenCollege of Pharmaceutical Sciences, Zhejiang University, Hangzhou, 310058, China.
Zhongjian ChenInstitute of Cancer and Basic Medicine (ICBM), Chinese Academy of Sciences, Zhejiang Province, Hangzhou, 310022, China. chenzj@zjcc.org.cn.
Yongjiang WuCollege of Pharmaceutical Sciences, Zhejiang University, Hangzhou, 310058, China. yjwu@zju.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Colorectal cancer (CRC) is a common malignancy occurring in the digestive system. Despite progress in surgery and therapy options, CRC is still a considerable cause of cancer mortality worldwide. In this study, a colon cancer patient-derived xenograft model was established to evaluate the antitumor activity of Shikonin. The protective effect underlying Shikonin was determined through assessing serum levels of liver enzymes (ALT, AST) and kidney functions (BuN, Scr) in PDX mice. Proteomics and metabolomics profiles were integrated to provide a systematic perspective in dynamic changes of proteins and global endogenous metabolites as well as their perturbed pathways. A total of 456 differently expressed proteins (DEPs), 32 differently expressed metabolites (DEMs) in tumor tissue, and 20 DEMs in mice serum were identified. The perturbation of arginine biosynthesis, purine metabolism, and biosynthesis of amino acids may mainly account for therapeutic mechanism of Shikonin. Furthermore, the expression of mRNAs participating in arginine biosynthesis (CPS1, OTC, Arg1) and do novo purine synthesis (GART, PAICS, ATIC) were validated through RT-qPCR. Our study provides new insights into the drug therapeutic strategies and a better understanding of antitumor mechanisms that might be valuable for further studies on Shikonin in the clinical treatment of colorectal cancer.

Indexed as

Alanine TransaminaseAnimalsAntineoplastic AgentsAspartate AminotransferasesBlood Urea NitrogenCell Cycle CheckpointsCell ProliferationColonic NeoplasmsCreatinineFemaleHumansMetabolomicsMiceMice, NudeNaphthoquinonesNeoplasm ProteinsAlanine TransaminaseAntineoplastic AgentsAspartate AminotransferasesCreatinineNaphthoquinonesNeoplasm Proteinsshikonin

Identifiers

PMID32839531
PMCPMC7445290

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.