Evidence map›Paper›PMID 32839343›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

Two-step release of kinase autoinhibition in discoidin domain receptor 1.

Douglas Sammon, Erhard Hohenester, Birgit Leitinger

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Structure of LRRK1 and mechanisms of autoinhibition and activation.Nature structural & molecular biology · 2023
    Article
  5. Article
  6. Review
  7. Review
  8. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Douglas SammonNational Heart and Lung Institute, Imperial College London, SW7 2AZ London, United Kingdom.ORCID 0000-0002-5014-1165
Erhard HohenesterDepartment of Life Sciences, Imperial College London, SW7 2AZ London, United Kingdom e.hohenester@imperial.ac.uk b.leitinger@imperial.ac.uk.
Birgit LeitingerNational Heart and Lung Institute, Imperial College London, SW7 2AZ London, United Kingdom; e.hohenester@imperial.ac.uk b.leitinger@imperial.ac.uk.ORCID 0000-0003-2426-1179
Imperial College London · GB

Funding

Biotechnology and Biological Sciences Research Council BB/D524840/1Biotechnology and Biological Sciences Research Council BB/R006245/1Wellcome TrustWellcome Trust 101748/Z/13/ZWellcome Trust 202926/Z/16/Z
6 · The paper itself

Abstract

Discoidin domain receptor 1 (DDR1) is a collagen-activated receptor tyrosine kinase with important functions in organogenesis and tissue homeostasis. Aberrant DDR1 activity contributes to the progression of human diseases, including fibrosis and cancer. How DDR1 activity is regulated is poorly understood. We investigated the function of the long intracellular juxtamembrane (JM) region of human DDR1 and found that the kinase-proximal segment, JM4, is an important regulator of kinase activity. Crystal structure analysis revealed that JM4 forms a hairpin that penetrates the kinase active site, reinforcing autoinhibition by the activation loop. Using in vitro enzymology with soluble kinase constructs, we established that release from autoinhibition occurs in two distinct steps: rapid autophosphorylation of the JM4 tyrosines, Tyr569 and Tyr586, followed by slower autophosphorylation of activation loop tyrosines. Mutation of JM4 tyrosines abolished collagen-induced DDR1 activation in cells. The insights may be used to develop allosteric, DDR1-specific, kinase inhibitors.

Indexed as

Amino Acid MotifsCatalytic DomainCollagenDiscoidin Domain Receptor 1Gene Expression Regulation, EnzymologicHumansPhosphorylationProtein DomainsCollagenDDR1 protein, humanDiscoidin Domain Receptor 1activation mechanismautoinhibitionreceptor tyrosine kinaseX-ray crystallography

Identifiers

PMID32839343
PMCPMC7486717
OpenAlexW3081100126

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.