Evidence map›Paper›PMID 32837456›Full record

ArticleInternational journal of peptide research and therapeutics2021

HPV16-E7 Protein T Cell Epitope Prediction and Global Therapeutic Peptide Vaccine Design Based on Human Leukocyte Antigen Frequency: An In-Silico Study.

Bahareh Bahmani, Zahra Amini-Bayat, Mohammad Mehdi Ranjbar, Nahid Bakhtiari, Amir-Hassan Zarnani

Open access · bronzeAbstract read
In one paragraph

Article in International journal of peptide research and therapeutics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
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  9. In silico analysis of virulence factors ofIn silico pharmacology · 2024
    Article
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  11. Article
  12. Review
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  14. A Comprehensive in Silico Analysis for Identification of Immunotherapeutic Epitopes of HPV-18.International journal of peptide research and therapeutics · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Bahareh BahmaniDepartment of Biotechnology, Iranian Research Organization for Science and Technology (IROST), Sh. Ehsani Rad St., Enqelab St., Parsa Sq., Ahmadabad Mostoufi Rd., Azadegan Highway, P. O. Box 3353-5111, Tehran, 3353136846 Islamic Republic of Iran.
Zahra Amini-BayatDepartment of Biotechnology, Iranian Research Organization for Science and Technology (IROST), Sh. Ehsani Rad St., Enqelab St., Parsa Sq., Ahmadabad Mostoufi Rd., Azadegan Highway, P. O. Box 3353-5111, Tehran, 3353136846 Islamic Republic of Iran.ORCID 0000-0003-2667-0486
Mohammad Mehdi RanjbarDepartment of Virology, Razi Vaccine and Serum Research Institute, (AREEO), Agricultural Research, Education and Extension Organization, Tehran, Iran.
Nahid BakhtiariDepartment of Biotechnology, Iranian Research Organization for Science and Technology (IROST), Sh. Ehsani Rad St., Enqelab St., Parsa Sq., Ahmadabad Mostoufi Rd., Azadegan Highway, P. O. Box 3353-5111, Tehran, 3353136846 Islamic Republic of Iran.
Amir-Hassan ZarnaniDepartment of Immunology, School of Public Health, Tehran University of Medical Sciences, Tehran, Iran.
Iranian Research Organization for Science and Technology · IRRazi Vaccine and Serum Research Institute · IRRoyan Institute · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cervical cancer is the second most common leading cause of women's death due to cancer worldwide, about 528,000 patients' cases and 266,000 deaths per year, related to human papillomavirus (HPV). Peptide-based vaccines being safe, stable, and easy to produce have demonstrated great potential to develop therapeutic HPV vaccine. In this study, the major histocompatibility complex (MHC) class I, class II T cell epitopes of HPV16-E7 were predicted. Therefore, we designed a plan to find the most effective peptides to prompt appropriate immune responses. For this purpose, retrieving protein sequences, conserved region identification, phylogenic tree construction, T cell epitope prediction, epitope-predicted population coverage calculation, and molecular docking were performed consecutively and most effective immune response prompting peptides were selected. Based on different tools index, six CD8+ T cells and six CD4+ epitopes were chosen. This combination of 12 epitopes created a putative global vaccine with a 95.06% population coverage. These identified peptides can be employed further for peptide analysis and can be used as a peptide or poly-epitope candidates for therapeutic vaccine studies to treat HPV-associated cancers.

Indexed as

Binding affinityBioinformaticsDockingEpitope predictionHuman papillomavirus 16-E7MHC-I, IIPeptide vaccine

Identifiers

PMID32837456
PMCPMC7320846
OpenAlexW3037575233

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.