Evidence map›Paper›PMID 32831018›Full record

ArticleBMC genomics2020

Global transcriptomic responses orchestrate difenoconazole resistance in Penicillium spp. causing blue mold of stored apple fruit.

Franz J Lichtner, Verneta L Gaskins, Kerik D Cox, Wayne M Jurick

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. An Overview of MajorJournal of fungi (Basel, Switzerland) · 2026
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  2. Recent Advances in Pathogenicity and Biocontrol of PostharvestJournal of fungi (Basel, Switzerland) · 2026
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  4. The Volatilomes ofMycobiology · 2026
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  5. Avirulent Isolates ofMicroorganisms · 2023
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  6. ComparativeMicroorganisms · 2022
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  7. Multiple Mutations and Overexpression in theCurrent issues in molecular biology · 2022
    Article
  8. Incidence, Speciation, and Morpho-Genetic Diversity ofJournal of fungi (Basel, Switzerland) · 2021
    Article
  9. Genomic Analyses ofJournal of fungi (Basel, Switzerland) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Franz J LichtnerGeisel School of Medicine, Dartmouth College, Hanover, NH, 03755, USA. franz.lichtner@gmail.com.ORCID http://orcid.org/0000-0002-4923-2852
Verneta L GaskinsU.S. Department of Agriculture-Agricultural Research Service, Beltsville, MD, 20705, USA.
Kerik D CoxPlant Pathology and Plant-Microbe Biology Section, Cornell University, Geneva, NY, 14456-0462, USA.
Wayne M JurickU.S. Department of Agriculture-Agricultural Research Service, Beltsville, MD, 20705, USA. wayne.jurick@usda.gov.
Agricultural Research Service · USCornell University · USDartmouth College · US

Funding

Agricultural Research Service 8042-42430-002-00D
6 · The paper itself

Abstract

backgroundBlue mold is a globally important and economically impactful postharvest disease of apples caused by multiple Penicillium spp. There are currently four postharvest fungicides registered for blue mold control, and some isolates have developed resistance manifesting in decay on fungicide-treated fruit during storage. To date, mechanisms of fungicide resistance have not been explored in this fungus using a transcriptomic approach.

resultsWe have conducted a comparative transcriptomic study by exposing naturally-occurring difenoconazole (DIF) resistant (G10) and sensitive (P11) blue mold isolates to technical grade difenoconazole, an azole fungicide in the commercial postharvest product Academy (Syngenta Crop Protection, LLC). Dynamic changes in gene expression patterns were observed encompassing candidates involved in active efflux and transcriptional regulators between the resistant and sensitive isolates. Unlike other systems, 3 isoforms of cytochrome P450 monoxygenase (CYP51A-C) were discovered and expressed in both sensitive and resistant strains upon difenoconazole treatment. Active efflux pumps were coordinately regulated in the resistant isolate and were shown to mediate the global resistance response as their inhibition reversed the difenoconazole-resistant phenotype in vitro.

conclusionsOur data support the observation that global transcriptional changes modulate difenoconazole resistance in Penicillium spp. While the dogma of CYP51 overexpression is supported in the resistant isolate, our studies shed light on additional new mechanisms of difenoconazole resistance on a global scale in Penicillium spp. These new findings broaden our fundamental understanding of azole fungicide resistance in fungi, which has identified multiple genetic targets, that can be used for the detection, management, and abatement of difenoconazole-resistant blue mold isolates during long-term storage of apples.

Indexed as

Fungicides, IndustrialMalusPenicilliumDioxolanesFruitTranscriptomeTriazolesdifenoconazoleDioxolanesFungicides, IndustrialTriazolesActive efflux pumpsAntimicrobial resistanceAzole fungicidesBlue moldGlobal gene networksPenicillium spp.Postharvest decayTranscriptional regulatorsTranscriptomics

Identifiers

PMID32831018
PMCPMC7444271
OpenAlexW3080750741

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.