Evidence map›Paper›PMID 32830857›Full record

ArticleBioscience reports2020

Bioinformatics analysis of prognostic value of PITX1 gene in breast cancer.

Qiaoyun Wang, Shuai Zhao, Lei Gan, Zhixiang Zhuang

Open access · goldAbstract read
In one paragraph

Article in Bioscience reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it, 38 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Integration analysis ofBiochemistry and biophysics reports · 2024
    Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Qiaoyun WangDepartment of Oncology, The Second Affiliated Hospital of Soochow University, No.1055, Sanxiang Road, Gusu District, Soochow 215004, Jiangsu Province, P.R. China.
Shuai ZhaoDepartment of Breast and Thyroid Surgery, Wuzhong People's Hospital of Soochow, No.61 Dongwu North Road, Soochow 215128, Jiangsu Province, P.R. China.
Lei GanDepartment of Oncology, The Second Affiliated Hospital of Soochow University, No.1055, Sanxiang Road, Gusu District, Soochow 215004, Jiangsu Province, P.R. China.
Zhixiang ZhuangDepartment of Oncology, The Second Affiliated Hospital of Soochow University, No.1055, Sanxiang Road, Gusu District, Soochow 215004, Jiangsu Province, P.R. China.
Soochow University · CNTongji University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPaired-like homeodomain transcription factor 1 (PITX1) participates in miscellaneous biological processes including cell growth, development, progression and invasion in various malignant tumors. However, the analysis of the association between PITX1 expression and the survival in breast cancer remains unclear.

methodsClinical prognostic parameters and survival data related to PITX1 in breast cancer patients were performed using the bioinformatic analysis including Oncomine, Bc-GenExMiner v4.3, PrognoScan and UCSC Xena.

resultsWe found that PITX1 gene expression was significantly higher in different histological classification of breast cancer. The Scarff-Bloom-Richardson (SBR) grade, Nottingham prognostic index (NPI), estrogen receptor (ER) negative, epidermal growth factor receptor-2 (HER2) positive, lymph node positive, triple-negative status and basal-like status were positively correlated with PITX1 level, except for patients' age and the progesterone receptor (PR) status. We have found that the increased PITX1 expression correlated with worse relapse-free survival, disease specific survival and overall survival. PITX1 was positively correlated with metastatic relapse-free survival and distant metastasis-free survival. We also confirmed positive correlation between PITX1 and the nucleotide-binding oligomerization domain 2 (NOD2).

conclusionThe lower expression of PITX1 was associated with better clinical prognostic parameters and clinical survival in breast cancer according to the bioinformatic analysis.

Indexed as

Breast NeoplasmsComputational BiologyDatabases, FactualFemaleGene Expression Regulation, NeoplasticHumansPaired Box Transcription FactorsPrognosishomeobox protein PITX1Paired Box Transcription Factorsbioinformationbreast cancerPITX1prognosis

Identifiers

PMID32830857
PMCPMC7494990
OpenAlexW3081204506

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.