Evidence map›Paper›PMID 32829411›Full record

ArticleClinical infectious diseases : an official publication of the Infectious Diseases Society of America2021

The Distribution and Spread of Susceptible and Resistant Neisseria gonorrhoeae Across Demographic Groups in a Major Metropolitan Center.

Tatum D Mortimer, Preeti Pathela, Addie Crawley, Jennifer L Rakeman, Ying Lin, Simon R Harris, Susan Blank, Julia A Schillinger, Yonatan H Grad

Open access · hybridAbstract read
In one paragraph

Article in Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 28 citations in OpenAlex.

  1. Rise ofAntimicrobial agents and chemotherapy · 2026
    Article
  2. Article
  3. bioRxiv : the preprint server for biology · 2026
    Article
  4. Inferring Sexual Network Bridging Using Genomics: A Simulation Study.medRxiv : the preprint server for health sciences · 2026
    Article
  5. CommensalAnnual review of microbiology · 2025
    Review
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  8. Gonorrhoea on the rise in Denmark since 2022: distinct clones drive increase in heterosexual individuals.Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Tatum D MortimerDepartment of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.ORCID 0000-0001-6255-690X
Preeti PathelaBureau of Sexually Transmitted Infections, New York City Department of Health and Mental Hygiene, New York City, New York, USA.
Addie CrawleyBureau of Sexually Transmitted Infections, New York City Department of Health and Mental Hygiene, New York City, New York, USA.
Jennifer L RakemanBureau of Public Health Laboratory, New York City Department of Health and Mental Hygiene, New York City, New York, USA.
Ying LinBureau of Public Health Laboratory, New York City Department of Health and Mental Hygiene, New York City, New York, USA.
Simon R HarrisMicrobiotica Ltd, Biodata Innovation Centre, Wellcome Genome Campus, Hinxton, United Kingdom.
Susan BlankBureau of Sexually Transmitted Infections, New York City Department of Health and Mental Hygiene, New York City, New York, USA.
Julia A SchillingerBureau of Sexually Transmitted Infections, New York City Department of Health and Mental Hygiene, New York City, New York, USA.
Yonatan H GradDepartment of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.ORCID 0000-0001-5646-1314
New York City Department of Health and Mental Hygiene · USCenters for Disease Control and Prevention · USBrigham and Women's Hospital · USHarvard University · US

Funding

Genomics approaches to elucidating pathways to antibiotic resistance in Neisseria gonorrhoeaeR01AI132606 · NIAID · HARVARD UNIVERSITY D/B/A HARVARD SCHOOL OF PUBLIC HEALTH · PI Yonatan H Grad · 2017 to 2026
$3.8M
Acquisition, maintenance, and transmission of antibiotic resistance in Neisseria gonorrhoeaeF32AI145157 · NIAID · HARVARD SCHOOL OF PUBLIC HEALTH · PI MORTIMER, TATUM DANIELLE · 2019 to 2021
$200k
National Institute of Allergy and Infectious DiseasesNIAID NIH HHS F32 AI145157NIAID NIH HHS R01 AI132606Wellcome Trust 098051
6 · The paper itself

Abstract

backgroundGenomic epidemiology studies of gonorrhea in the United States have primarily focused on national surveillance for antibiotic resistance, and patterns of local transmission between demographic groups of resistant and susceptible strains are unknown.

methodsWe analyzed a convenience sample of genome sequences, antibiotic susceptibility, and patient data from 897 gonococcal isolates cultured at the New York City (NYC) Public Health Laboratory from NYC Department of Health and Mental Hygiene (DOHMH) Sexual Health Clinic (SHC) patients, primarily in 2012-2013. We reconstructed the gonococcal phylogeny, defined transmission clusters using a 10 nonrecombinant single nucleotide polymorphism threshold, tested for clustering of demographic groups, and placed NYC isolates in a global phylogenetic context.

resultsThe NYC gonococcal phylogeny reflected global diversity with isolates from 22/23 of the prevalent global lineages (96%). Isolates clustered on the phylogeny by patient sexual behavior (P < .001) and race/ethnicity (P < .001). Minimum inhibitory concentrations were higher across antibiotics in isolates from men who have sex with men compared to heterosexuals (P < .001) and white heterosexuals compared to black heterosexuals (P < .01). In our dataset, all large transmission clusters (≥10 samples) of N. gonorrhoeae were susceptible to ciprofloxacin, ceftriaxone, and azithromycin, and comprised isolates from patients across demographic groups.

conclusionsAll large transmission clusters were susceptible to gonorrhea therapies, suggesting that resistance to empiric therapy was not a main driver of spread, even as risk for resistance varied across demographic groups. Further study of local transmission networks is needed to identify drivers of transmission.

Indexed as

GonorrheaSexual and Gender MinoritiesAnti-Bacterial AgentsAzithromycinDemographyDrug Resistance, BacterialHomosexuality, MaleHumansMaleMicrobial Sensitivity TestsNeisseria gonorrhoeaePhylogenyAnti-Bacterial AgentsAzithromycinantimicrobial resistanceepidemiologygonorrheasexually transmitted infectionwhole genome sequencing

Identifiers

PMID32829411
PMCPMC8563204
OpenAlexW3080290518

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.