Evidence map›Paper›PMID 32826317›Full record

ArticleThe Journal of biological chemistry2020

Csx3 is a cyclic oligonucleotide phosphodiesterase associated with type III CRISPR-Cas that degrades the second messenger cA

Sharidan Brown, Colin C Gauvin, Alexander A Charbonneau, Nathaniel Burman, C Martin Lawrence

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Diversity and abundance of ring nucleases in type III CRISPR-Cas loci.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Article
  6. Review
  7. Article
  8. Article
  9. Genomic Distribution of Pro-VirulentInternational journal of molecular sciences · 2023
    Article
  10. Article
  11. Cyclic Tetra-Adenylate (cABiomolecules · 2021
    Article
  12. CRISPR Element Patterns vs. Pathoadaptability of ClinicalAntibiotics (Basel, Switzerland) · 2021
    Article
  13. Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sharidan BrownDepartment of Chemistry and Biochemistry, Montana State University, Bozeman, Montana, USA.
Colin C GauvinDepartment of Chemistry and Biochemistry, Montana State University, Bozeman, Montana, USA; Thermal Biology Institute, Montana State University, Bozeman, Montana, USA.
Alexander A CharbonneauDepartment of Chemistry and Biochemistry, Montana State University, Bozeman, Montana, USA; Thermal Biology Institute, Montana State University, Bozeman, Montana, USA.
Nathaniel BurmanDepartment of Chemistry and Biochemistry, Montana State University, Bozeman, Montana, USA.
C Martin LawrenceDepartment of Chemistry and Biochemistry, Montana State University, Bozeman, Montana, USA; Thermal Biology Institute, Montana State University, Bozeman, Montana, USA. Electronic address: lawrence@montana.edu.

Funding

Research Core (Developmental Research Project Program)P20GM103474 · NIGMS · MONTANA STATE UNIVERSITY - BOZEMAN · PI Jeffrey Good · 2012 to 2026
$60.0M
User Training and OutreachP30GM124165 · NIGMS · CORNELL UNIVERSITY · PI MALCOLM S. CAPEL · 2018 to 2026
$34.2M
Pixel Array Detector for Macromolecular CrystallographyS10OD021527 · OD · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2016 to 2016
$2.0M
NIGMS NIH HHS P20 GM103474NIGMS NIH HHS P30 GM124165NIH HHS S10 OD021527
6 · The paper itself

Abstract

Cas10 is the signature gene for type III CRISPR-Cas surveillance complexes. Unlike type I and type II systems, type III systems do not require a protospacer adjacent motif and target nascent RNA associated with transcriptionally active DNA. Further, target RNA recognition activates the cyclase domain of Cas10, resulting in the synthesis of cyclic oligoadenylate second messengers. These second messengers are recognized by ancillary Cas proteins harboring CRISPR-associated Rossmann fold (CARF) domains and regulate the activities of these proteins in response to invading nucleic acid. Csx3 is a distant member of the CARF domain superfamily previously characterized as a Mn

Indexed as

CRISPR-Cas SystemsSecond Messenger SystemsAdenine NucleotidesCRISPR-Associated ProteinsOligoribonucleotidesPhosphoric Diester HydrolasesProtein BindingProtein FoldingSignal Transduction2',5'-oligoadenylateAdenine NucleotidesCRISPR-Associated ProteinsOligoribonucleotidesPhosphoric Diester HydrolasesCARFCRISPR/Cascyclic nucleotidecyclic tetra-adenylatefluorescencefluorescence lifetimephosphodiesterasephosphodiesterasesRNaseX-ray crystallography

Identifiers

PMID32826317
PMCPMC7606696

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.