Evidence map›Paper›PMID 32825262›Full record

ArticleViruses2020

Dengue Virus Serotype 4 Is Responsible for the Outbreak of Dengue in East Java City of Jember, Indonesia.

Aryati Aryati, Billy J Wrahatnala, Benediktus Yohan, May Fanny, Faradila K N Hakim, Eka Putri Sunari, Nelly Zuroidah, Puspa Wardhani, Marsha S Santoso, Dominicus Husada and 4 more

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 33 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Aryati AryatiDepartment of Clinical Pathology, Faculty of Medicine, Universitas Airlangga, Surabaya 60286, Indonesia.
Billy J WrahatnalaMaster Program of Tropical Medicine, Faculty of Medicine, Universitas Airlangga, Surabaya 60286, Indonesia.
Benediktus YohanEijkman Institute for Molecular Biology, Jakarta 10430, Indonesia.ORCID 0000-0003-2378-2386
May FannyClinical Pathology Sub-Specialization Program, Universitas Airlangga, Surabaya 60286, Indonesia.
Faradila K N HakimMaster Program of Tropical Medicine, Faculty of Medicine, Universitas Airlangga, Surabaya 60286, Indonesia.
Eka Putri SunariClinical Pathology Specialization Program, Universitas Airlangga, Surabaya 60286, Indonesia.
Nelly ZuroidahClinical Pathology Specialization Program, Universitas Airlangga, Surabaya 60286, Indonesia.
Puspa WardhaniDepartment of Clinical Pathology, Faculty of Medicine, Universitas Airlangga, Surabaya 60286, Indonesia.
Marsha S SantosoEijkman Institute for Molecular Biology, Jakarta 10430, Indonesia.
Dominicus HusadaDepartment of Child Health, Faculty of Medicine, Universitas Airlangga, Surabaya 60286, Indonesia.
Ali RohmanDepartment of Chemistry, Faculty of Science and Technology, Universitas Airlangga, Surabaya 60115, Indonesia.ORCID 0000-0002-8177-5881
Siti Nadia TarmiziDirectorate of Vector-Borne and Zoonotic Disease, Ministry of Health of Indonesia, Jakarta 12950, Indonesia.
Justus T O SieversEijkman Institute for Molecular Biology, Jakarta 10430, Indonesia.ORCID 0000-0003-0252-6594
R Tedjo SasmonoEijkman Institute for Molecular Biology, Jakarta 10430, Indonesia.ORCID 0000-0003-0986-2590
Airlangga University · IDEijkman Institute for Molecular Biology · IDMinistry of Health · ID

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Outbreaks of dengue virus (DENV) in Indonesia have been mainly caused by the DENV serotype-1; -2; or -3. The DENV-4 was the least-reported serotype in Indonesia during the last five decades. We recently conducted a molecular epidemiology study of dengue in the Jember regency, East Java province, Indonesia. Dengue is endemic in the region and outbreaks occur annually. We investigated the clinical characteristics and etiology of dengue-like febrile illness in this regency to understand the disease dynamics. A total of 191 patients with clinical symptoms similar to dengue were recruited during an 11-month study in 2019-2020. Children accounted for the majority of cases and dengue burden was estimated in 41.4% of the cases based on NS1 antigen, viral RNA, and IgG/IgM antibody detection with the majority (73.4%) being primary infections. Secondary infection was significantly associated with a higher risk of severe dengue manifestation. All four DENV serotypes were detected in Jember. Strikingly, we observed the predominance of DENV-4, followed by DENV-3, DENV-1, and DENV-2. Genotype determination using Envelope gene sequence revealed the classification into Genotype I, Cosmopolitan Genotype, Genotype I, and Genotype II for DENV-1, -2, -3, and -4, respectively. The predominance of DENV-4 in Jember may be associated with a new wave of DENV infections and spread in a non-immune population lacking a herd-immunity to this particular serotype.

Indexed as

AdolescentAdultChildChild, PreschoolDengueDengue VirusDisease OutbreaksFemaleHumansIndonesiaInfantMaleMiddle AgedMolecular EpidemiologyYoung AdultdengueIndonesiaJavamolecular epidemiologyserotype

Identifiers

PMID32825262
PMCPMC7551817
OpenAlexW3079384515

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.