Evidence map›Paper›PMID 32823819›Full record

ArticleAnimals : an open access journal from MDPI2020

Analysis of Genetic Diversity in the Czech Spotted Dog.

Karolína Machová, Anita Kranjčevičová, Luboš Vostrý, Emil Krupa

Abstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Pedigree-Based Genetic Diversity in the South African Boerboel Dog Breed.Animals : an open access journal from MDPI · 2024
    Article
  2. Ethical Concerns about Fashionable Dog Breeding.Animals : an open access journal from MDPI · 2024
    Review
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Karolína MachováDepartment of Genetics and Breeding, Faculty of Agrobiology, Food and Natural Sciences, Czech University of Life Sciences, 165 00 Prague, Czech Republic.
Anita KranjčevičováDepartment of Genetics and Breeding, Faculty of Agrobiology, Food and Natural Sciences, Czech University of Life Sciences, 165 00 Prague, Czech Republic.ORCID 0000-0002-7313-7388
Luboš VostrýDepartment of Genetics and Breeding, Faculty of Agrobiology, Food and Natural Sciences, Czech University of Life Sciences, 165 00 Prague, Czech Republic.
Emil KrupaDepartment of Genetics and Breeding of Farm Animals, Institute of Animal Science, 104 01 Prague, Czech Republic.ORCID 0000-0001-7848-5122

Funding

Faculty of Agrobiology, Food and Natural Resources, Czech University of Life Sciences SV20-9-21360Ministry of Agriculture of the Czech Republic MZE-RO0719
6 · The paper itself

Abstract

Loss off genetic diversity negatively affects most of the modern dog breeds. However, no breed created strictly for laboratory purposes has been analyzed so far. In this paper, we sought to explore by pedigree analysis exactly such a breed-the Czech Spotted Dog (CSD). The pedigree contained a total of 2010 individuals registered since the second half of the 20th century. Parameters such as the mean average relatedness, coefficient of inbreeding, effective population size, effective number of founders, ancestors and founder genomes and loss of genetic diversity-which was calculated based on the reference population and pedigree completeness-were used to assess genetic variability. Compared to the founding population, the reference population lost 38.2% of its genetic diversity, of which 26% is due to random genetic drift and 12.2% is due to the uneven contribution of the founders. The reference population is highly inbred and related. The average inbreeding coefficient is 36.45%, and the mean average relatedness is 74.83%. The effective population size calculated based on the increase of inbreeding coefficient is 10.28. Thus, the Czech Spotted Dog suffered significant losses of genetic diversity that threaten its future existence.

Indexed as

genetic variabilityinbreedingpedigree analysissmall population

Identifiers

PMID32823819
PMCPMC7459660

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.