Evidence map›Paper›PMID 32822567›Full record

ArticleCell2020

A Human IgSF Cell-Surface Interactome Reveals a Complex Network of Protein-Protein Interactions.

Woj M Wojtowicz, Jost Vielmetter, Ricardo A Fernandes, Dirk H Siepe, Catharine L Eastman, Gregory B Chisholm, Sarah Cox, Heath Klock, Paul W Anderson, Sarah M Rue and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 127 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Binocular Circuitry as a Model for Understanding Experience-Dependent Circuit Development across the Mammalian Cortex.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2026
    Review
  9. BDCD: a comprehensive Brain Disease Cell-cell communication Database.Database : the journal of biological databases and curation · 2026
    Article
  10. Article
  11. Article
  12. C4d, a high-affinity LilrB2 ligand, is elevated in Alzheimer's disease and mediates synapse pruning.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Journal of oral microbiology · 2025
    Article
  20. Frontiers in genetics · 2025
    Article

7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 4 institutions in 1 country.

Woj M WojtowiczDepartment of Molecular and Cellular Physiology, Stanford University School of Medicine, Stanford, CA 94305, USA. Electronic address: woj@stanford.edu.
Jost VielmetterDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA.
Ricardo A FernandesDepartment of Molecular and Cellular Physiology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Dirk H SiepeDepartment of Molecular and Cellular Physiology, Stanford University School of Medicine, Stanford, CA 94305, USA; Howard Hughes Medical Institute, Stanford University School of Medicine, Stanford, CA 94305, USA.
Catharine L EastmanDepartment of Molecular and Cellular Physiology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Gregory B ChisholmDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA.
Sarah CoxThe Genomics Institute of the Novartis Research Foundation, San Diego, CA 92121, USA.
Heath KlockThe Genomics Institute of the Novartis Research Foundation, San Diego, CA 92121, USA.
Paul W AndersonThe Genomics Institute of the Novartis Research Foundation, San Diego, CA 92121, USA.
Sarah M RueThe Genomics Institute of the Novartis Research Foundation, San Diego, CA 92121, USA.
Jessica J MillerThe Genomics Institute of the Novartis Research Foundation, San Diego, CA 92121, USA.
Scott M GlaserThe Genomics Institute of the Novartis Research Foundation, San Diego, CA 92121, USA.
Melisa L BragstadThe Genomics Institute of the Novartis Research Foundation, San Diego, CA 92121, USA.
Julie VanceThe Genomics Institute of the Novartis Research Foundation, San Diego, CA 92121, USA.
Annie W LamDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA.
Scott A LesleyThe Genomics Institute of the Novartis Research Foundation, San Diego, CA 92121, USA.
Kai ZinnDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA.
K Christopher GarciaDepartment of Molecular and Cellular Physiology, Stanford University School of Medicine, Stanford, CA 94305, USA; Howard Hughes Medical Institute, Stanford University School of Medicine, Stanford, CA 94305, USA; Department of Structural Biology, Stanford University School of Medicine, Stanford, CA 94305, USA. Electronic address: kcgarcia@stanford.edu.
Genomics Institute of the Novartis Research Foundation · USCalifornia Institute of Technology · USStanford University · USHoward Hughes Medical Institute · US

Funding

MOLECULAR GENETICS OF DROSOPHILA CNS DEVELOPMENTR01NS028182 · NINDS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI Engin Ozkan, KAI G ZINN · 1990 to 2026
$7.3M
Molecular Genetics of CNS DevelopmentR37NS028182 · NINDS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI ZINN, KAI G · 2014 to 2020
$3.3M
Regulation of synaptic targeting in the Drosophila larval neuromuscular system by immunoglobulin superfamily cell surface proteinsR01NS096509 · NINDS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI ZINN, KAI G · 2016 to 2020
$1.8M
Molecular Recognition Principles, Engineering and Function of Neural Wiring ReceptorsR01NS097161 · NINDS · UNIVERSITY OF CHICAGO · PI OZKAN, ENGIN · 2016 to 2020
$1.8M
Howard Hughes Medical InstituteNINDS NIH HHS R01 NS028182NINDS NIH HHS R01 NS096509NINDS NIH HHS R01 NS097161NINDS NIH HHS R37 NS028182
6 · The paper itself

Abstract

Cell-surface protein-protein interactions (PPIs) mediate cell-cell communication, recognition, and responses. We executed an interactome screen of 564 human cell-surface and secreted proteins, most of which are immunoglobulin superfamily (IgSF) proteins, using a high-throughput, automated ELISA-based screening platform employing a pooled-protein strategy to test all 318,096 PPI combinations. Screen results, augmented by phylogenetic homology analysis, revealed ∼380 previously unreported PPIs. We validated a subset using surface plasmon resonance and cell binding assays. Observed PPIs reveal a large and complex network of interactions both within and across biological systems. We identified new PPIs for receptors with well-characterized ligands and binding partners for "orphan" receptors. New PPIs include proteins expressed on multiple cell types and involved in diverse processes including immune and nervous system development and function, differentiation/proliferation, metabolism, vascularization, and reproduction. These PPIs provide a resource for further biological investigation into their functional relevance and may offer new therapeutic drug targets.

Indexed as

LigandsDCC ReceptorHumansPhylogenyProtein Interaction MapsReceptor-Like Protein Tyrosine Phosphatases, Class 2Receptors, Cell SurfaceReceptors, Interleukin-1Signaling Lymphocytic Activation Molecule FamilySurface Plasmon ResonanceDCC ReceptorLigandsReceptor-Like Protein Tyrosine Phosphatases, Class 2Receptors, Cell SurfaceReceptors, Interleukin-1Signaling Lymphocytic Activation Molecule Familycell-surfacehuman IgSFinteractomeligandnetworkprotein-protein interaction screenreceptor

Identifiers

PMID32822567
PMCPMC7440162
OpenAlexW3079491962

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.