Evidence map›Paper›PMID 32822340›Full record

ArticlePLoS computational biology2020

Simulating flow induced migration in vascular remodelling.

Ashkan Tabibian, Siavash Ghaffari, Diego A Vargas, Hans Van Oosterwyck, Elizabeth A V Jones

Open access · goldAbstract read
In one paragraph

Article in PLoS computational biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Ashkan TabibianCentre for Molecular and Vascular Biology, Department of Cardiovascular Sciences, KU Leuven, Belgium.ORCID 0000-0002-1986-8534
Siavash GhaffariKeenan Research Centre for Biomedical Science, Saint Michael's Hospital, Toronto, Canada.ORCID 0000-0002-8190-5674
Diego A VargasBiomechanics Section, Department of Mechanical Engineering, KU Leuven, Leuven, Belgium.ORCID 0000-0003-2627-2066
Hans Van OosterwyckBiomechanics Section, Department of Mechanical Engineering, KU Leuven, Leuven, Belgium.ORCID 0000-0002-2142-9717
Elizabeth A V JonesCentre for Molecular and Vascular Biology, Department of Cardiovascular Sciences, KU Leuven, Belgium.
KU Leuven · BEVIB-KU Leuven Center for Cancer Biology · BESt. Michael's Hospital · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Shear stress induces directed endothelial cell (EC) migration in blood vessels leading to vessel diameter increase and induction of vascular maturation. Other factors, such as EC elongation and interaction between ECs and non-vascular areas are also important. Computational models have previously been used to study collective cell migration. These models can be used to predict EC migration and its effect on vascular remodelling during embryogenesis. We combined live time-lapse imaging of the remodelling vasculature of the quail embryo yolk sac with flow quantification using a combination of micro-Particle Image Velocimetry and computational fluid dynamics. We then used the flow and remodelling data to inform a model of EC migration during remodelling. To obtain the relation between shear stress and velocity in vitro for EC cells, we developed a flow chamber to assess how confluent sheets of ECs migrate in response to shear stress. Using these data as an input, we developed a multiphase, self-propelled particles (SPP) model where individual agents are driven to migrate based on the level of shear stress while maintaining appropriate spatial relationship to nearby agents. These agents elongate, interact with each other, and with avascular agents at each time-step of the model. We compared predicted vascular shape to real vascular shape after 4 hours from our time-lapse movies and performed sensitivity analysis on the various model parameters. Our model shows that shear stress has the largest effect on the remodelling process. Importantly, however, elongation played an especially important part in remodelling. This model provides a powerful tool to study the input of different biological processes on remodelling.

Indexed as

HydrodynamicsVascular RemodelingAnimalsBlood CirculationCell MovementCell ShapeComputational BiologyEndothelial CellsQuailStress, Mechanical

Identifiers

PMID32822340
PMCPMC7478591
OpenAlexW3080315651

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.