Evidence map›Paper›PMID 32819409›Full record

ArticleActa veterinaria Scandinavica2020

Characterization of virulence genes in Escherichia coli strains isolated from pre-weaned calves in the Republic of Korea.

Ji-Hyoung Ryu, SuHee Kim, Jinho Park, Kyoung-Seong Choi

Open access · goldAbstract read
In one paragraph

Article in Acta veterinaria Scandinavica, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.8field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 33 citations in OpenAlex.

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  12. Integration of the Microbiome, Metabolome and Transcriptome RevealsAnimals : an open access journal from MDPI · 2023
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  13. Occurrence ofPathogens (Basel, Switzerland) · 2022
    Article
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Ji-Hyoung RyuDepartment of Animal Science and Biotechnology, College of Ecology and Environmental Science, Kyungpook National University, Sangju, 37224, Republic of Korea.
SuHee KimGyeongsang National University Hospital, Jinju, 52727, Republic of Korea.
Jinho ParkCollege of Veterinary Medicine, Jeonbuk National University, Iksan, 54596, Republic of Korea.
Kyoung-Seong ChoiDepartment of Animal Science and Biotechnology, College of Ecology and Environmental Science, Kyungpook National University, Sangju, 37224, Republic of Korea. kschoi3@knu.ac.kr.ORCID http://orcid.org/0000-0002-2271-5360
Kyungpook National University · KRGyeongsang National University Hospital · KRJeonbuk National University · KR

Funding

National Research Foundation of Korea (KR) 2018R1D1A1B07048271
6 · The paper itself

Abstract

backgroundEscherichia coli is an important cause of diarrhea in calves and its diarrheagenic properties are related to presence of certain virulence genes. In this study, the prevalence of virulence genes F5, F17, F41, sta, stx1, stx2, eae, and saa in E. coli isolated from pre-weaned calves presenting with (n= 329) or without diarrhea (n= 360) was explored using multiplex polymerase chain reaction. We also evaluated the association between detection of E. coli and the presence of diarrhea.

resultsEscherichia coli was detected in 56.3% (388/689) of the fecal samples and showed the highest prevalence (66.5%) in 21-40-day-old calves and the lowest (46.3%) among those that were 1-20 days old. The prevalence of the enterotoxigenic E. coli (ETEC) and Shiga toxin-producing E. coli (STEC) pathotypes was detected in 73.9% and 15.9%, respectively. The results showed no association between diarrhea and the presence of E. coli in general, ETEC or STEC. The F17 gene was the most frequently detected virulence factor in E. coli of calves of all ages regardless of diarrhea. Interestingly, the results show that the calves aged 41-60 days with F17-positive E. coli are at a higher risk for production of Shiga toxin (Stx1; 95% confidence intervals: 1.86-31.95; P = 0.005) compared to calves aged 1-20 days; no association between this finding and diarrhea was observed among the calves of this age group. Moreover, the virulence genes associated with the ETEC and STEC strains were not significantly associated with pathogenicity in this study cohort.

conclusionsThese results suggest that while the incidence of E. coli is age-related, there was no relationship linking E. coli virulence genes to calf age and diarrhea. Furthermore, the present study demonstrated that detection of E. coli strains either with or without virulence factors was not associated with diarrhea in pre-weaned calves.

Indexed as

AnimalsCattleCattle DiseasesDiarrheaEscherichia coliEscherichia coli InfectionsEscherichia coli ProteinsPrevalenceRepublic of KoreaVirulenceVirulence FactorsEscherichia coli ProteinsVirulence FactorsDiarrheaETECF17Pre-weaned calvesSTECVirulence genes

Identifiers

PMID32819409
PMCPMC7439630
OpenAlexW3080347369

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.