Evidence map›Paper›PMID 32819338›Full record

ArticleBMC biotechnology2020

Isolation of novel citrus and plum fruit promoters and their functional characterization for fruit biotechnology.

Kasturi Dasgupta, Sara Hotton, William Belknap, Yasra Syed, Christopher Dardick, Roger Thilmony, James G Thomson

Abstract read
In one paragraph

Article in BMC biotechnology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Tissue-specific expression ofFrontiers in plant science · 2022
    Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Kasturi DasguptaCitrus Research Board, Visalia, CA, USA.
Sara HottonCrop Improvement and Genetics, Western Regional Research Center, USDA-ARS, Albany, CA, USA.
William BelknapCrop Improvement and Genetics, Western Regional Research Center, USDA-ARS, Albany, CA, USA.
Yasra SyedCrop Improvement and Genetics, Western Regional Research Center, USDA-ARS, Albany, CA, USA.
Christopher DardickGenetic Improvement of Fruit Crops using advanced Genomics and Breeding Technologies, Kearneysville, WV, USA.
Roger ThilmonyCrop Improvement and Genetics, Western Regional Research Center, USDA-ARS, Albany, CA, USA. Roger.Thilmony@ars.usda.gov.
James G ThomsonCrop Improvement and Genetics, Western Regional Research Center, USDA-ARS, Albany, CA, USA. James.Thomson@ars.usda.gov.ORCID 0000-0001-9847-1377

Funding

California Citrus Research Board 5200–141California Citrus Research Board 5200–155USDA-ARS 2030-21000-020-00D
6 · The paper itself

Abstract

backgroundPromoters that confer expression in fruit tissues are important tools for genetic engineering of fruit quality traits, yet few fruit-specific promoters have been identified, particularly for citrus fruit development.

resultsIn this study, we report five citrus fruit-specific/preferential promoters for genetic engineering. Additionally, we have characterized a novel fruit-preferential promoter from plum. Genes specifically expressed in fruit tissues were selected and their isolated promoter regions were fused with the GUSPlus reporter gene for evaluation in transgenic plants. Stable transformation in Micro-Tom tomato demonstrated that the candidate promoter regions exhibit differing levels of expression and with varying degrees of fruit specificity.

conclusionsAmong the five candidate citrus promoters characterized in this study, the CitSEP promoter showed a fruit-specific expression pattern, while the CitWAX and CitJuSac promoters exhibited high fruit-preferential expression with strong activity in the fruit, weak activity in floral tissues and low or undetectable activity in other tissues. The CitVO1, CitUNK and PamMybA promoters, while exhibiting strong fruit-preferential expression, also showed consistent weak but detectable activity in leaves and other vegetative tissues. Use of these fruit specific/preferential promoters for genetic engineering can help with precise expression of beneficial genes and help with accurate prediction of the activity of new genes in host fruit plants.

Indexed as

BiotechnologyPromoter Regions, GeneticArabidopsisCitrusFood HandlingFruitGene Expression Regulation, PlantGenes, PlantGenes, ReporterGenetic EngineeringPhenotypePlant LeavesPlant ProteinsPlants, Genetically ModifiedPrunus domesticaSequence AnalysisPlant ProteinsCitrus (Citrus sinensis)Fruit-specific expressionPlum (Prunus americana)PromoterTomato (Solanum lycopersicum)Transgenic

Identifiers

PMID32819338
PMCPMC7439555

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.