Evidence map›Paper›PMID 32817961›Full record

ArticlemedRxiv : the preprint server for health sciences2020

Quantifying absolute neutralization titers against SARS-CoV-2 by a standardized virus neutralization assay allows for cross-cohort comparisons of COVID-19 sera.

Kasopefoluwa Y Oguntuyo, Christian S Stevens, Chuan-Tien Hung, Satoshi Ikegame, Joshua A Acklin, Shreyas S Kowdle, Jillian C Carmichael, Hsin-Ping Chiu, Kristopher D Azarm, Griffin D Haas and 22 more

Open access · greenAbstract readPreprint
In one paragraph

Article in medRxiv : the preprint server for health sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 40 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

32 authors at 4 institutions in 2 countries.

Kasopefoluwa Y OguntuyoDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Christian S StevensDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Chuan-Tien HungDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Satoshi IkegameDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Joshua A AcklinDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Shreyas S KowdleDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Jillian C CarmichaelDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Hsin-Ping ChiuDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Kristopher D AzarmDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Griffin D HaasDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Fatima AmanatDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Jéromine KlinglerDivision of Infectious Diseases, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Ian BaineDepartment of Pathology, Molecular and Cell-Based Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, 10029.
Suzanne ArinsburgDepartment of Pathology, Molecular and Cell-Based Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, 10029.
Juan C BandresDivision of Infectious Diseases, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Mohammed N A SiddiqueyDepartment of Microbiology and Immunology, Louisiana State University Health Science Center Shreveport, Shreveport, LA 71103.
Robert M SchilkeDepartment of Microbiology and Immunology, Louisiana State University Health Science Center Shreveport, Shreveport, LA 71103.
Matthew D WoolardDepartment of Microbiology and Immunology, Louisiana State University Health Science Center Shreveport, Shreveport, LA 71103.
Hongbo ZhangDepartment of Microbiology and Immunology, Louisiana State University Health Science Center Shreveport, Shreveport, LA 71103.
COVIDAR Argentina Consortium
Andrew J DutyDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Thomas A KrausDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Thomas M MoranDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Domenico TortorellaDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Jean K LimDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Andrea V GamarnikDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Catarina E HioeDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Susan Zolla-PaznerDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Stanimir S IvanovDepartment of Microbiology and Immunology, Louisiana State University Health Science Center Shreveport, Shreveport, LA 71103.
Jeremy P KamilDepartment of Microbiology and Immunology, Louisiana State University Health Science Center Shreveport, Shreveport, LA 71103.
Florian KrammerDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Benhur LeeDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Icahn School of Medicine at Mount Sinai · USLouisiana State University Health Sciences Center Shreveport · USJames J. Peters VA Medical Center · USConsejo Nacional de Investigaciones Científicas y Técnicas · AR

Funding

COLLABORATIVE INFLUENZA VACCINE INNOVATION CENTER: UNIVERSAL INFLUENZA VACCINE RESEARCH75N93019C00051 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI KRAMMER, FLORIAN · 2019 to 2025
$105.4M
MSHS Translational Science HubUL1TR001433 · NCATS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI WRIGHT, ROSALIND J · 2015 to 2019
$26.6M
TRAINING PROGRAM: MECHANISMS OF VIRUS-HOST INTERACTIONST32AI007647 · NIAID · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI Domenico Tortorella · 2000 to 2026
$11.5M
Harnessing Abs specific for immunogenic and conserved Env epitopes to protect against HIVR01AI139290 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI HIOE, CATARINA E · 2018 to 2022
$4.1M
Roles of the UL148 glycoprotein in human cytomegalovirus infectionR01AI116851 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Jeremy Phillip Kamil · 2016 to 2026
$3.5M
Tropism, pathogenicity, and potential for zoonotic spillover of emergent henipa- and henipa-like virusesR01AI123449 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI LEE, BENHUR · 2016 to 2020
$2.7M
Regulation of Legionella pneumophila pathogenesis by the central eukaryotic metabolic checkpoint kinase Mechanistic Target of Rapamycin (MTOR)R01AI143839 · NIAID · LOUISIANA STATE UNIV HSC SHREVEPORT · PI IVANOV, STANIMIR STEFANOV · 2019 to 2023
$1.8M
Human Parainfluenza Virus 3 Infection in a Novel Human Lung Tissue ModelR21AI149033 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI LEE, BENHUR, LIM, JEAN KYOU · 2020 to 2021
$463k
Metabolic and Immune Consequences of Antibiotic-Related Microbiome Alterations during TB TreatmentR21AI148033 · NIAID · NORTHWESTERN UNIVERSITY · PI MAIGA, MAMOUDOU · 2019 to 2020
$440k
Elucidating the molecular determinants of Henipavirus envelope-antibody and envelope-receptor interactions on viral entryF31AI154739 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI OGUNTUYO, KASOPEFOLUWA Y. · 2020 to 2022
$135k
Elucidating Virus:Host Interactions of Human Parainfluenza Virus 3 in a Novel Human Lung Tissue Explant ModelF31HL149295 · NHLBI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI ACKLIN, JOSHUA · 2020 to 2022
$109k
BLR&D Research Career Scientist Award ApplicationIK6BX004607 · VA · JAMES J PETERS VA MEDICAL CENTER · PI HIOE, CATARINA E · 2019 to 2025
–
BLRD VA I01 BX003860BLRD VA IK6 BX004607NCATS NIH HHS UL1 TR001433NHLBI NIH HHS F31 HL149295NIAID NIH HHS 75N93019C00051NIAID NIH HHS F31 AI154739NIAID NIH HHS HHSN272201400008CNIAID NIH HHS R01 AI116851NIAID NIH HHS R01 AI123449NIAID NIH HHS R01 AI139290NIAID NIH HHS R01 AI143839NIAID NIH HHS R21 AI148033NIAID NIH HHS R21 AI149033NIAID NIH HHS T32 AI007647
6 · The paper itself

Abstract

The global COVID-19 pandemic has mobilized efforts to develop vaccines and antibody-based therapeutics, including convalescent plasma therapy, that inhibit viral entry by inducing or transferring neutralizing antibodies (nAbs) against the SARS-CoV-2 spike glycoprotein (CoV2-S). However, rigorous efficacy testing requires extensive screening with live virus under onerous BSL3 conditions which limits high throughput screening of patient and vaccine sera. Myriad BSL-2 compatible surrogate virus neutralization assays (VNAs) have been developed to overcome this barrier. Yet, there is marked variability between VNAs and how their results are presented, making inter-group comparisons difficult. To address these limitations, we developed a standardized VNA using VSVΔG-based CoV-2-S pseudotyped particles (CoV2pp) that can be robustly produced at scale and generate accurate neutralizing titers within 18 hours post-infection. Our standardized CoV2pp VNA showed a strong positive correlation with CoV2-S ELISA and live virus neutralizations in confirmed convalescent patient sera. Three independent groups subsequently validated our standardized CoV2pp VNA (n>120). Our data show that absolute (abs) IC50, IC80, and IC90 values can be legitimately compared across diverse cohorts, highlight the substantial but consistent variability in neutralization potency across these cohorts, and support the use of absIC80 as a more meaningful metric for assessing the neutralization potency of vaccine or convalescent sera. Lastly, we used our CoV2pp in a screen to identify ultra-permissive 293T clones that stably express ACE2 or ACE2+TMPRSS2. When used in combination with our CoV2pp, we can now produce CoV2pp sufficient for 150,000 standardized VNA/week.

Identifiers

PMID32817961
PMCPMC7430605
OpenAlexW3049723712

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.