Evidence map›Paper›PMID 32817424›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

The m

Yiren Xiao, Kaushik N Thakkar, Hongjuan Zhao, James Broughton, Yang Li, Jose A Seoane, Anh N Diep, Thomas J Metzner, Rie von Eyben, David L Dill and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed, 1 pooled it
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 1 synthesis or guideline pooled it, 100 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Review
  5. Article
  6. Review
  7. Article
  8. Review
  9. Rescuing the Function of Missense-Mutated Tumor SuppressorbioRxiv : the preprint server for biology · 2026
    Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. mFrontiers in cell and developmental biology · 2026
    Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 3 institutions in 1 country.

Yiren XiaoDepartment of Radiation Oncology, Stanford University, Stanford, CA 94305.ORCID 0000-0003-3804-3383
Kaushik N ThakkarDepartment of Radiation Oncology, Stanford University, Stanford, CA 94305.ORCID 0000-0002-4900-3371
Hongjuan ZhaoDepartment of Urology, Stanford University, Stanford, CA 94305.
James BroughtonMammoth Biosciences, South San Francisco, CA 94080.
Yang LiDepartment of Radiation Oncology, Stanford University, Stanford, CA 94305.ORCID 0000-0002-1914-5598
Jose A SeoaneDepartment of Medicine, Stanford University, Stanford, CA 94305.ORCID 0000-0002-3856-9177
Anh N DiepDepartment of Radiation Oncology, Stanford University, Stanford, CA 94305.
Thomas J MetznerDepartment of Urology, Stanford University, Stanford, CA 94305.
Rie von EybenDepartment of Radiation Oncology, Stanford University, Stanford, CA 94305.
David L DillDepartment of Computer Science, Stanford University, Stanford, CA 94305.
James D BrooksDepartment of Urology, Stanford University, Stanford, CA 94305.
Christina CurtisDepartment of Medicine, Stanford University, Stanford, CA 94305.ORCID 0000-0003-0166-3802
John T LeppertDepartment of Urology, Stanford University, Stanford, CA 94305.ORCID 0000-0001-9980-3863
Jiangbin YeDepartment of Radiation Oncology, Stanford University, Stanford, CA 94305.ORCID 0000-0003-1117-4869
Donna M PeehlDeparment of Genetics, Stanford University, Stanford, CA 94305.
Amato J GiacciaDepartment of Radiation Oncology, Stanford University, Stanford, CA 94305.
Subarna SinhaDepartment of Computer Science, Stanford University, Stanford, CA 94305.
Erinn B RankinDepartment of Radiation Oncology, Stanford University, Stanford, CA 94305; erankin@stanford.edu.
Stanford University · USMammoth Biosciences (United States) · USUniversity of California, San Francisco · US

Funding

Translational Biology CoreP01CA257907 · NCI · STANFORD UNIVERSITY · PI Maximilian Diehn, Quynh-Thu Xuan Le · 2022 to 2026
$12.0M
Preclinical Testing of a Novel Therapy Targeting AXL in Advanced Kidney CancerR01CA198291 · NCI · STANFORD UNIVERSITY · PI RANKIN, ERINN B · 2016 to 2020
$2.4M
The role of the RNA demethylase FTO in metabolic reprogramming of renal cell carcinomaR01CA272432 · NCI · STANFORD UNIVERSITY · PI Erinn B Rankin · 2023 to 2026
$1.8M
NCI NIH HHS P01 CA257907NCI NIH HHS R01 CA198291NCI NIH HHS R01 CA272432
6 · The paper itself

Abstract

Loss of the von Hippel-Lindau (VHL) tumor suppressor is a hallmark feature of renal clear cell carcinoma. VHL inactivation results in the constitutive activation of the hypoxia-inducible factors (HIFs) HIF-1 and HIF-2 and their downstream targets, including the proangiogenic factors VEGF and PDGF. However, antiangiogenic agents and HIF-2 inhibitors have limited efficacy in cancer therapy due to the development of resistance. Here we employed an innovative computational platform, Mining of Synthetic Lethals (MiSL), to identify synthetic lethal interactions with the loss of VHL through analysis of primary tumor genomic and transcriptomic data. Using this approach, we identified a synthetic lethal interaction between VHL and the m

Indexed as

Synthetic Lethal MutationsAlpha-Ketoglutarate-Dependent Dioxygenase FTOAmino Acid Transport System ASCAnimalsBasic Helix-Loop-Helix ProteinsCarcinoma, Renal CellCell Line, TumorComputer SimulationEndothelial PAS Domain-Containing Protein 1HumansHypoxia-Inducible Factor 1Kidney NeoplasmsMice, KnockoutMinor Histocompatibility AntigensVon Hippel-Lindau Tumor Suppressor ProteinAlpha-Ketoglutarate-Dependent Dioxygenase FTOAmino Acid Transport System ASCBasic Helix-Loop-Helix ProteinsEndothelial PAS Domain-Containing Protein 1FTO protein, humanHypoxia-Inducible Factor 1Minor Histocompatibility AntigensSLC1A5 protein, humanVHL protein, humanVon Hippel-Lindau Tumor Suppressor ProteinFTOkidney cancerSLC1A5synthetic lethalityvon Hippel–Lindau

Identifiers

PMID32817424
PMCPMC7474618
OpenAlexW3068085031

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.