Evidence map›Paper›PMID 32817218›Full record

ArticleJournal of virology2020

Orsay Virus CP-δ Adopts a Novel β-Bracelet Structural Fold and Incorporates into Virions as a Head Fiber.

Yusong R Guo, Yanlin Fan, Ying Zhou, Miao Jin, Jim L Zhang, Hongbing Jiang, Matthew V Holt, Tao Wang, Nicolas L Young, David Wang and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of virology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.1field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Yusong R Guo *Department of BioSciences, Rice University, Houston, Texas, USA.
Yanlin Fan *Department of BioSciences, Rice University, Houston, Texas, USA.
Ying ZhouDepartment of BioSciences, Rice University, Houston, Texas, USA.
Miao JinDepartment of BioSciences, Rice University, Houston, Texas, USA.
Jim L ZhangDepartment of BioSciences, Rice University, Houston, Texas, USA.
Hongbing JiangDepartment of Molecular Microbiology and Pathology & Immunology, Washington University, School of Medicine, St. Louis, Missouri, USA.
Matthew V HoltVerna & Marrs McLean Department of Biochemistry & Molecular Biology, Baylor College of Medicine, Houston, Texas, USA.
Tao WangVerna & Marrs McLean Department of Biochemistry & Molecular Biology, Baylor College of Medicine, Houston, Texas, USA.
Nicolas L YoungVerna & Marrs McLean Department of Biochemistry & Molecular Biology, Baylor College of Medicine, Houston, Texas, USA.
David WangDepartment of Molecular Microbiology and Pathology & Immunology, Washington University, School of Medicine, St. Louis, Missouri, USA.
Weiwei ZhongDepartment of BioSciences, Rice University, Houston, Texas, USA weiwei.zhong@gmail.com ytao@rice.edu.
Yizhi J TaoDepartment of BioSciences, Rice University, Houston, Texas, USA weiwei.zhong@gmail.com ytao@rice.edu.ORCID 0000-0002-0149-2241
Rice University · USBaylor College of Medicine · USWashington University in St. Louis · US

Funding

The infection mechanism of the nematode virus OrsayR01AI122356 · NIAID · RICE UNIVERSITY · PI TAO, YIZHI JANE · 2016 to 2020
$1.9M
NIAID NIH HHS R01 AI122356
6 · The paper itself

Abstract

Fiber proteins are commonly found in eukaryotic and prokaryotic viruses, where they play important roles in mediating viral attachment and host cell entry. They typically form trimeric structures and are incorporated into virions via noncovalent interactions. Orsay virus, a small RNA virus which specifically infects the laboratory model nematode

Indexed as

Amino Acid SequenceAnimalsCaenorhabditis elegansCapsid ProteinsCloning, MolecularCrystallography, X-RayEscherichia coliGene ExpressionGenetic VectorsHost SpecificityModels, MolecularNodaviridaePolyproteinsProtein Conformation, alpha-HelicalProtein Conformation, beta-StrandProtein Interaction Domains and MotifsCapsid ProteinsPolyproteinsRecombinant ProteinsScleroproteinsViral ProteinsCaenorhabditis eleganscrystallographyOrsay virusviral fiberβ-bracelet

Identifiers

PMID32817218
PMCPMC7565637
OpenAlexW3050739343

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.