Evidence map›Paper›PMID 32817106›Full record

ArticlemBio2020

Phenotypic Parallelism during Experimental Adaptation of a Free-Living Bacterium to the Zebrafish Gut.

Jarrett F Lebov, Brandon H Schlomann, Catherine D Robinson, Brendan J M Bohannan

Open access · goldAbstract read
In one paragraph

Article in mBio, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Intrahost evolution of the gut microbiota.Nature reviews. Microbiology · 2023
    Review
  6. Article
  7. Review
  8. Article
  9. Genetic innovations in animal-microbe symbioses.Nature reviews. Genetics · 2022
    Review
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Jarrett F LebovInstitute of Ecology and Evolution, University of Oregon, Eugene, Oregon, USA jarrett.lebov@som.umaryland.edu.ORCID 0000-0001-8554-7846
Brandon H SchlomannInstitute of Molecular Biology, University of Oregon, Eugene, Oregon, USA.
Catherine D RobinsonInstitute of Molecular Biology, University of Oregon, Eugene, Oregon, USA.
Brendan J M BohannanInstitute of Ecology and Evolution, University of Oregon, Eugene, Oregon, USA.
University of Oregon · USUniversity of Maryland, Baltimore · US

Funding

MOLECULAR BIOLOGY AND BIOPHYSICST32GM007759 · NIGMS · UNIVERSITY OF OREGON · PI NOLEN, BRADLEY J · 1985 to 2021
$8.5M
Live Imaging CoreP01GM125576 · NIGMS · UNIVERSITY OF OREGON · PI BOHANNAN, BRENDAN, EISEN, JUDITH S · 2018 to 2022
$7.8M
Graduate Training in Genetics Administrative Supplement - Career Curriculum DevelopmentT32GM007413 · NIGMS · UNIVERSITY OF OREGON · PI GUILLEMIN, KAREN J · 1985 to 2022
$7.8M
NIGMS NIH HHS P01 GM125576NIGMS NIH HHS T32 GM007413NIGMS NIH HHS T32 GM007759
6 · The paper itself

Abstract

Although animals encounter a plethora of bacterial species throughout their lives, only a subset colonize vertebrate digestive tracts, and these bacteria can profoundly influence the health and development of their animal hosts. However, our understanding of how bacteria initiate symbioses with animal hosts remains underexplored, and this process is central to the assembly and function of gut bacterial communities. Therefore, we used experimental evolution to study a free-living bacterium as it adapts to a novel vertebrate host by serially passaging replicate populations of

Indexed as

Gastrointestinal MicrobiomeAdaptation, PhysiologicalAnimalsBiofilmsIntestinesLarvaMutation, MissensePhenotypeShewanellaSymbiosisZebrafishbacteriologybiofilmecologyevolutiongeneticsgenomicshost-microbeShewanellaswimming motilitysymbiosiszebrafish

Identifiers

PMID32817106
PMCPMC7439477
OpenAlexW3063784676

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.