Evidence map›Paper›PMID 32816994›Full record

ArticleThe Journal of biological chemistry2020

PGAP6, a GPI-specific phospholipase A2, has narrow substrate specificity against GPI-anchored proteins.

Gun-Hee Lee, Morihisa Fujita, Hideki Nakanishi, Haruhiko Miyata, Masahito Ikawa, Yusuke Maeda, Yoshiko Murakami, Taroh Kinoshita

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Gun-Hee LeeResearch Institute for Microbial Diseases, Osaka University, Osaka, Japan.
Morihisa FujitaKey Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi, Jiangsu, China.ORCID 0000-0002-0344-2408
Hideki NakanishiKey Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi, Jiangsu, China.ORCID 0000-0001-6968-2335
Haruhiko MiyataResearch Institute for Microbial Diseases, Osaka University, Osaka, Japan.
Masahito IkawaResearch Institute for Microbial Diseases, Osaka University, Osaka, Japan.ORCID 0000-0001-9859-6217
Yusuke MaedaResearch Institute for Microbial Diseases, Osaka University, Osaka, Japan.
Yoshiko MurakamiResearch Institute for Microbial Diseases, Osaka University, Osaka, Japan.
Taroh KinoshitaResearch Institute for Microbial Diseases, Osaka University, Osaka, Japan tkinoshi@biken.osaka-u.ac.jp.ORCID 0000-0001-7166-7257
The University of Osaka · JPJiangnan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

PGAP6, also known as TMEM8A, is a phospholipase A2 with specificity to glycosylphosphatidylinositol (GPI) and expressed on the surface of various cells. CRIPTO, a GPI-anchored co-receptor for a morphogenic factor Nodal, is a sensitive substrate of PGAP6. PGAP6-mediated shedding of CRIPTO plays a critical role in an early stage of embryogenesis. In contrast, CRYPTIC, a close family member of CRIPTO, is resistant to PGAP6. In this report, chimeras between CRIPTO and CRYPTIC and truncate mutants of PGAP6 were used to demonstrate that the Cripto-1/FRL1/Cryptic domain of CRIPTO is recognized by an N-terminal domain of PGAP6 for processing. We also report that among 56 human GPI-anchored proteins tested, only glypican 3, prostasin, SPACA4, and contactin-1, in addition to CRIPTO, are sensitive to PGAP6, indicating that PGAP6 has a narrow specificity toward various GPI-anchored proteins.

Indexed as

Amino Acid SequenceAnimalsCell LineGPI-Linked ProteinsHumansIntercellular Signaling Peptides and ProteinsMaleMembrane GlycoproteinsMiceMutagenesisNeoplasm ProteinsProstasinProtein BindingProtein DomainsReceptors, Cell SurfaceSerine EndopeptidasesGPI-Linked ProteinsIntercellular Signaling Peptides and ProteinsMembrane GlycoproteinsNeoplasm ProteinsProstasinReceptors, Cell SurfaceSerine EndopeptidasesSPACA4 protein, humanTDGF1 protein, humanTMEM8A protein, humandevelopmental factorglycobiologyglycolipidglycosylphosphatidylinositol (GPI anchor)phospholipasephospholipase Apost-translational modification (PTM)spermsubstrate specificity

Identifiers

PMID32816994
PMCPMC7573272
OpenAlexW3069125360

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.