Evidence map›Paper›PMID 32816461›Full record

ArticleJournal of the American Chemical Society2020

Interpenetrating Cubes in the X-ray Crystallographic Structure of a Peptide Derived from Medin

William J Howitz, Michał Wierzbicki, Rudy William Cabanela, Cindy Saliba, Ariana Motavalli, Ngoctran Tran, James S Nowick

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Exploring amyloid oligomers with peptide model systems.Current opinion in chemical biology · 2021
    Review
  6. Facile Fabrication of Protein-Macrocycle Frameworks.Journal of the American Chemical Society · 2021
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

William J HowitzDepartment of Chemistry and Department of Pharmaceutical Sciences, University of California, Irvine, Irvine, California 92697-2025, United States.ORCID 0000-0001-6323-7126
Michał WierzbickiDepartment of Chemistry and Department of Pharmaceutical Sciences, University of California, Irvine, Irvine, California 92697-2025, United States.ORCID 0000-0002-9217-634X
Rudy William CabanelaDepartment of Chemistry and Department of Pharmaceutical Sciences, University of California, Irvine, Irvine, California 92697-2025, United States.
Cindy SalibaDepartment of Chemistry and Department of Pharmaceutical Sciences, University of California, Irvine, Irvine, California 92697-2025, United States.
Ariana MotavalliDepartment of Chemistry and Department of Pharmaceutical Sciences, University of California, Irvine, Irvine, California 92697-2025, United States.
Ngoctran TranDepartment of Chemistry and Department of Pharmaceutical Sciences, University of California, Irvine, Irvine, California 92697-2025, United States.
James S NowickDepartment of Chemistry and Department of Pharmaceutical Sciences, University of California, Irvine, Irvine, California 92697-2025, United States.ORCID 0000-0002-2273-1029
University of California, Irvine · US

Funding

User Training and OutreachP30GM124169 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI PAUL David ADAMS, Gregory L Hura · 2017 to 2026
$28.6M
Purchase of an Microwave Peptide SynthesizerR01GM097562 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI NOWICK, JAMES S · 2012 to 2019
$2.5M
NIGMS NIH HHS P30 GM124169NIGMS NIH HHS R01 GM097562
6 · The paper itself

Abstract

Amyloidogenic peptides and proteins are rich sources of supramolecular assemblies. Sequences derived from well-known amyloids, including Aβ, human islet amyloid polypeptide, and tau have been found to assemble as fibrils, nanosheets, ribbons, and nanotubes. The supramolecular assembly of medin, a 50-amino acid peptide that forms fibrillary deposits in aging human vasculature, has not been heavily investigated. In this work, we present an X-ray crystallographic structure of a cyclic β-sheet peptide derived from the 19-36 region of medin that assembles to form interpenetrating cubes. The edge of each cube is composed of a single peptide, and each vertex is occupied by a divalent metal ion. This structure may be considered a metal-organic framework (MOF) containing a large peptide ligand. This work demonstrates that peptides containing Glu or Asp that are preorganized to adopt β-hairpin structures can serve as ligands and assemble with metal ions to form MOFs.

Indexed as

Amino Acid SequenceAmyloid beta-PeptidesCrystallography, X-RayHumansModels, MolecularProtein ConformationAmyloid beta-Peptides

Identifiers

PMID32816461
PMCPMC7819122
OpenAlexW3081015045

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.