Evidence map›Paper›PMID 32816167›Full record

ReviewAnnals of biomedical engineering2020

Scalable Signature-Based Molecular Diagnostics Through On-chip Biomarker Profiling Coupled with Machine Learning.

John Molinski, Amogha Tadimety, Alison Burklund, John X J Zhang

Abstract readReview
In one paragraph

Review in Annals of biomedical engineering, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

John MolinskiThayer School of Engineering at Dartmouth, 14 Engineering Drive, Hanover, NH, 03755, USA.
Amogha TadimetyThayer School of Engineering at Dartmouth, 14 Engineering Drive, Hanover, NH, 03755, USA.
Alison BurklundThayer School of Engineering at Dartmouth, 14 Engineering Drive, Hanover, NH, 03755, USA.
John X J ZhangThayer School of Engineering at Dartmouth, 14 Engineering Drive, Hanover, NH, 03755, USA. john.zhang@dartmouth.edu.ORCID http://orcid.org/0000-0002-9506-0713

Funding

Translational Engineering in Cancer (TEC)P30CA023108 · NCI · DARTMOUTH COLLEGE · PI Fred W Kolling IV · 1985 to 2026
$91.3M
Implantable Cardiac Power Generation Using Flexible 3D Porous Thin FilmsR01HL137157 · NHLBI · DARTMOUTH COLLEGE · PI ZHANG, XIAOJING · 2016 to 2020
$2.2M
Detection of CarcinomasR01CA139070 · NCI · UNIVERSITY OF TEXAS AT AUSTIN · PI ZHANG, XIAOJING · 2011 to 2013
$925k
NCI NIH HHS P30 CA023108NCI NIH HHS R01 CA139070NHLBI NIH HHS R01 HL137157NIMH NIH HHS 1R01OD022910-01
6 · The paper itself

Abstract

Molecular diagnostics have traditionally relied on discrete biological substances as diagnostic markers. In recent years however, advances in on-chip biomarker screening technologies and data analytics have enabled signature-based diagnostics. Such diagnostics aim to utilize unique combinations of multiple biomarkers or diagnostic 'fingerprints' rather than discrete analyte measurements. This approach has shown to improve both diagnostic accuracy and diagnostic specificity. In this review, signature-based diagnostics enabled by microfluidic and micro-/nano- technologies will be reviewed with a focus on device design and data analysis pipelines and methodologies. With increasing amounts of data available from microfluidic biomarker screening, isolation, and detection platforms, advanced data handling and analytics approaches can be employed. Thus, current data analysis approaches including machine learning and recent advances with image processing, along with potential future directions will be explored. Lastly, the needs and gaps in current literature will be elucidated to inform future efforts towards development of molecular diagnostics and biomarker screening technologies.

Indexed as

Molecular Diagnostic TechniquesAnimalsBiomarkersHumansLab-On-A-Chip DevicesMachine LearningMicrofluidic Analytical TechniquesBiomarkersAdvanced data analyticsBiomarker screeningMicro-/nano- technologiesMolecular profiling

Identifiers

PMID32816167
PMCPMC7785517

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.