Evidence map›Paper›PMID 32816093›Full record

ArticleArchives of toxicology2021

An in vitro coculture system of human peripheral blood mononuclear cells with hepatocellular carcinoma-derived cells for predicting drug-induced liver injury.

Shingo Oda, Yuka Uchida, Michael D Aleo, Petra H Koza-Taylor, Yusuke Matsui, Masanori Hizue, Lisa D Marroquin, Jessica Whritenour, Eri Uchida, Tsuyoshi Yokoi

Abstract read
PubMed Publisher
In one paragraph

Article in Archives of toxicology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Frontiers in immunology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Shingo OdaDivision of Clinical Pharmacology, Department of Drug Safety Sciences, Nagoya University Graduate School of Medicine, 65 Tsurumai-cho, Showa-ku, Nagoya, 466-8550, Japan. shingo61@med.nagoya-u.ac.jp.ORCID 0000-0002-8684-601X
Yuka UchidaDivision of Clinical Pharmacology, Department of Drug Safety Sciences, Nagoya University Graduate School of Medicine, 65 Tsurumai-cho, Showa-ku, Nagoya, 466-8550, Japan.
Michael D AleoDrug Safety Research and Development, Pfizer Inc, Groton, CT, USA.
Petra H Koza-TaylorDrug Safety Research and Development, Pfizer Inc, Groton, CT, USA.
Yusuke MatsuiLaboratory of Intelligence Healthcare, Nagoya University Graduate School of Medicine, Nagoya, Japan.
Masanori HizueDrug Safety Research and Development, Pfizer Inc, Tokyo, Japan.
Lisa D MarroquinDrug Safety Research and Development, Pfizer Inc, Groton, CT, USA.
Jessica WhritenourDrug Safety Research and Development, Pfizer Inc, Groton, CT, USA.
Eri UchidaDrug Safety Research and Development, Pfizer Inc, Tokyo, Japan.
Tsuyoshi YokoiDivision of Clinical Pharmacology, Department of Drug Safety Sciences, Nagoya University Graduate School of Medicine, 65 Tsurumai-cho, Showa-ku, Nagoya, 466-8550, Japan.
Nagoya University · JPPfizer (United States) · USPfizer (Japan) · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Preventing clinical drug-induced liver injury (DILI) remains a major challenge, because DILI develops via multifactorial mechanisms. Immune and inflammatory reactions are considered important mechanisms of DILI; however, biomarkers from in vitro systems using immune cells have not been comprehensively studied. The aims of this study were (1) to identify promising biomarker genes for predicting DILI in an in vitro coculture model of peripheral blood mononuclear cells (PBMCs) with a human liver cell line, and (2) to evaluate these genes as predictors of DILI using a panel of drugs with different clinical DILI risk. Transcriptome-wide analysis of PBMCs cocultured with HepG2 or differentiated HepaRG cells that were treated with several drugs revealed an appropriate separation of DILI-positive and DILI-negative drugs, from which 12 putative biomarker genes were selected. To evaluate the predictive performance of these genes, PBMCs cocultured with HepG2 cells were exposed to 77 different drugs, and gene expression levels in PBMCs were determined. The MET proto-oncogene receptor tyrosine kinase (MET) showed the highest area under the receiver-operating characteristic curve (AUC) value of 0.81 among the 12 genes with a high sensitivity/specificity (85/66%). However, a stepwise logistic regression model using the 12 identified genes showed the highest AUC value of 0.94 with a high sensitivity/specificity (93/86%). Taken together, we established a coculture system using PBMCs and HepG2 cells and selected biomarkers that can predict DILI risk. The established model would be useful in detecting the DILI potential of compounds, in particular those that involve an immune mechanism.

Indexed as

Carcinoma, HepatocellularCell SurvivalChemical and Drug Induced Liver InjuryCoculture TechniquesGene Expression ProfilingGenetic MarkersHepatocytesHep G2 CellsHumansLeukocytes, MononuclearLiver NeoplasmsOligonucleotide Array Sequence AnalysisProto-Oncogene MasRisk AssessmentTranscriptomeGenetic MarkersMAS1 protein, humanProto-Oncogene MasCell-based assayCocultureDrug-induced liver injuryImmune reactionPeripheral blood mononuclear cells

Identifiers

PMID32816093
OpenAlexW3081442148

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.