Evidence map›Paper›PMID 32814200›Full record

ArticleJournal of biomedical informatics2020

Predictive modeling of bacterial infections and antibiotic therapy needs in critically ill adults.

Garrett Eickelberg, L Nelson Sanchez-Pinto, Yuan Luo

Abstract read
In one paragraph

Article in Journal of biomedical informatics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Artificial intelligence in antimicrobial stewardship: a systematic review and meta-analysis of predictive performance and diagnostic accuracy.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2025
    Pooled it
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Review
  8. Transportability of bacterial infection prediction models for critically ill patients.Journal of the American Medical Informatics Association : JAMIA · 2023
    Article
  9. Article
  10. Review
  11. Modeling transmission of pathogens in healthcare settings.Current opinion in infectious diseases · 2021
    Review
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Garrett EickelbergDepartment of Preventitive Medicine (Health & Biomedical Informatics), Feinberg School of Medicine, 750 N Lake Shore, Chicago, IL 60611, USA.
L Nelson Sanchez-PintoDepartment of Preventitive Medicine (Health & Biomedical Informatics), Feinberg School of Medicine, 750 N Lake Shore, Chicago, IL 60611, USA; Department of Pediatrics (Critical Care), 225 E. Chicago Avenue, Chicago, IL 60611, USA. Electronic address: lazaro.sanchez-pinto@northwestern.edu.
Yuan LuoDepartment of Preventitive Medicine (Health & Biomedical Informatics), Feinberg School of Medicine, 750 N Lake Shore, Chicago, IL 60611, USA. Electronic address: yuan.luo@northwestern.edu.

Funding

Predoctoral Training Program in Biomedical Data Driven Discovery (BD3)T32LM012203 · NLM · NORTHWESTERN UNIVERSITY AT CHICAGO · PI KLABJAN, DIEGO, STARREN, JUSTIN B. · 2015 to 2019
$1.1M
A Data-Driven Analysis of Pediatric Organ Dysfunction Patterns To Discover Sepsis PhenotypesR21HD096402 · NICHD · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI SANCHEZ-PINTO, LAZARO NELSON · 2019 to 2020
$541k
Bayesian Generative Methods for Extracting and Modeling Relations in EHR NarrativesR21LM012618 · NLM · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LUO, YUAN · 2017 to 2018
$390k
NICHD NIH HHS R21 HD096402NLM NIH HHS R21 LM012618NLM NIH HHS T32 LM012203
6 · The paper itself

Abstract

Unnecessary antibiotic regimens in the intensive care unit (ICU) are associated with adverse patient outcomes and antimicrobial resistance. Bacterial infections (BI) are both common and deadly in ICUs, and as a result, patients with a suspected BI are routinely started on broad-spectrum antibiotics prior to having confirmatory microbiologic culture results or when an occult BI is suspected, a practice known as empiric antibiotic therapy (EAT). However, EAT guidelines lack consensus and existing methods to quantify patient-level BI risk rely largely on clinical judgement and inaccurate biomarkers or expensive diagnostic tests. As a consequence, patients with low risk of BI often are continued on EAT, exposing them to unnecessary side effects. Augmenting current intuition-based practices with data-driven predictions of BI risk could help inform clinical decisions to shorten the duration of unnecessary EAT and improve patient outcomes. We propose a novel framework to identify ICU patients with low risk of BI as candidates for earlier EAT discontinuation. For this study, patients suspected of having a community-acquired BI were identified in the Medical Information Mart for Intensive Care III (MIMIC-III) dataset and categorized based on microbiologic culture results and EAT duration. Using structured longitudinal data collected up to 24-, 48-, and 72-hours after starting EAT, our best models identified patients at low risk of BI with AUROCs up to 0.8 and negative predictive values >93%. Overall, these results demonstrate the feasibility of forecasting BI risk in a critical care setting using patient features found in the electronic health record and call for more extensive research in this promising, yet relatively understudied, area.

Indexed as

Bacterial InfectionsCritical IllnessAdultAnti-Bacterial AgentsCritical CareHumansIntensive Care UnitsAnti-Bacterial AgentsAntibiotic stewardshipCritical careElectronic health recordsMachine learningMIMICPrediction models

Identifiers

PMID32814200
PMCPMC7530142

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.