Evidence map›Paper›PMID 32814033›Full record

ArticleStructure (London, England : 1993)2020

Need for Speed: Examining Protein Behavior during CryoEM Grid Preparation at Different Timescales.

David P Klebl, Molly S C Gravett, Dimitrios Kontziampasis, David J Wright, Robin S Bon, Diana C F Monteiro, Martin Trebbin, Frank Sobott, Howard D White, Michele C Darrow and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Structure (London, England : 1993), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
8.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 91 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Microsecond Time-Resolved Cryo-EM Based on Jet Vitrification.bioRxiv : the preprint server for biology · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. VitroJet: new features and case studies.Acta crystallographica. Section D, Structural biology · 2024
    Article
  15. Cryo-EM sample preparation for high-resolution structure studies.Acta crystallographica. Section F, Structural biology communications · 2024
    Article
  16. Article
  17. Review
  18. Cryo-electron microscopy-based drug design.Frontiers in molecular biosciences · 2024
    Review
  19. Structural basis of substrate progression through the bacterial chaperonin cycle.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 3 countries.

David P KleblSchool of Biomedical Sciences, Faculty of Biological Sciences & Astbury Centre for Structural and Molecular Biology, University of Leeds, Leeds LS2 9JT, UK.
Molly S C GravettSchool of Molecular and Cellular Biology, Faculty of Biological Sciences & Astbury Centre for Structural and Molecular Biology, University of Leeds, Leeds LS2 9JT, UK.
Dimitrios KontziampasisSchool of Biomedical Sciences, Faculty of Biological Sciences & Astbury Centre for Structural and Molecular Biology, University of Leeds, Leeds LS2 9JT, UK; School of Chemical and Process Engineering, Faculty of Engineering and Physical Sciences, University of Leeds, Leeds LS2 9JT, UK; Institute of Business, Industry & Leadership, University of Cumbria, Carlisle CA1 2HH, UK.
David J WrightSchool of Medicine, Faculty of Medicine and Health & Astbury Centre for Structural and Molecular Biology, University of Leeds, Leeds, UK.
Robin S BonSchool of Medicine, Faculty of Medicine and Health & Astbury Centre for Structural and Molecular Biology, University of Leeds, Leeds, UK.
Diana C F MonteiroHauptman-Woodward Medical Research Institute, Buffalo, NY, USA.
Martin TrebbinHauptman-Woodward Medical Research Institute, Buffalo, NY, USA; Department of Chemistry, State University of New York at Buffalo, Buffalo, NY, USA.
Frank SobottSchool of Molecular and Cellular Biology, Faculty of Biological Sciences & Astbury Centre for Structural and Molecular Biology, University of Leeds, Leeds LS2 9JT, UK; Department of Chemistry, Biomolecular & Analytical Mass Spectrometry Group, University of Antwerp, Antwerp, Belgium.
Howard D WhiteDepartment of Physiological Sciences, Eastern Virginia Medical School, Norfolk, VA, USA.
Michele C DarrowSPT Labtech, Melbourn Science Park, Melbourn, Cambridge, UK.
Rebecca F ThompsonSchool of Molecular and Cellular Biology, Faculty of Biological Sciences & Astbury Centre for Structural and Molecular Biology, University of Leeds, Leeds LS2 9JT, UK. Electronic address: r.f.thompson@leeds.ac.uk.
Stephen P MuenchSchool of Biomedical Sciences, Faculty of Biological Sciences & Astbury Centre for Structural and Molecular Biology, University of Leeds, Leeds LS2 9JT, UK. Electronic address: s.p.muench@leeds.ac.uk.
University of Leeds · GBHauptman-Woodward Medical Research Institute · USEastern Virginia Medical School · USMelbourn Science Park · GB

Funding

Biotechnology and Biological Sciences Research Council BB/P020208/1Biotechnology and Biological Sciences Research Council BB/P026397/1Wellcome Trust 108466/Z/15/Z
6 · The paper itself

Abstract

A host of new technologies are under development to improve the quality and reproducibility of cryoelectron microscopy (cryoEM) grid preparation. Here we have systematically investigated the preparation of three macromolecular complexes using three different vitrification devices (Vitrobot, chameleon, and a time-resolved cryoEM device) on various timescales, including grids made within 6 ms (the fastest reported to date), to interrogate particle behavior at the air-water interface for different timepoints. Results demonstrate that different macromolecular complexes can respond to the thin-film environment formed during cryoEM sample preparation in highly variable ways, shedding light on why cryoEM sample preparation can be difficult to optimize. We demonstrate that reducing time between sample application and vitrification is just one tool to improve cryoEM grid quality, but that it is unlikely to be a generic "silver bullet" for improving the quality of every cryoEM sample preparation.

Indexed as

AirAnimalsApoferritinsBiomarkersChaperonin 60Cryoelectron MicroscopyEscherichia coliGene ExpressionHorsesHumansImaging, Three-DimensionalMitochondrial ProteinsRibosomal ProteinsRibosomesSurface PropertiesTime FactorsApoferritinsBiomarkersChaperonin 60HSPD1 protein, humanMitochondrial Proteinsribosomal protein L31Ribosomal ProteinsWaterair-water-interfacecryoEMHSPD1ribosomesample preparation

Identifiers

PMID32814033
PMCPMC7652391
OpenAlexW3057795080

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.