Evidence map›Paper›PMID 32813712›Full record

ArticlePLoS computational biology2020

Dynamic estimation of auditory temporal response functions via state-space models with Gaussian mixture process noise.

Sina Miran, Alessandro Presacco, Jonathan Z Simon, Michael C Fu, Steven I Marcus, Behtash Babadi

Abstract read
In one paragraph

Article in PLoS computational biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Sina MiranStarkey Hearing Technologies, Eden Prairie, Minnesota, United States of America.ORCID 0000-0003-4840-5739
Alessandro PresaccoInstitute for Systems Research, University of Maryland, College Park, Maryland, United States of America.
Jonathan Z SimonInstitute for Systems Research, University of Maryland, College Park, Maryland, United States of America.ORCID 0000-0003-0858-0698
Michael C FuInstitute for Systems Research, University of Maryland, College Park, Maryland, United States of America.ORCID 0000-0003-2105-4932
Steven I MarcusInstitute for Systems Research, University of Maryland, College Park, Maryland, United States of America.ORCID 0000-0002-4926-9567
Behtash BabadiInstitute for Systems Research, University of Maryland, College Park, Maryland, United States of America.ORCID 0000-0002-9856-006X

Funding

Auditory Scene Analysis and Temporal Cortical ComputationsR01DC014085 · NIDCD · UNIV OF MARYLAND, COLLEGE PARK · PI SIMON, JONATHAN Z. · 2015 to 2019
$1.5M
NIDCD NIH HHS R01 DC014085
6 · The paper itself

Abstract

Estimating the latent dynamics underlying biological processes is a central problem in computational biology. State-space models with Gaussian statistics are widely used for estimation of such latent dynamics and have been successfully utilized in the analysis of biological data. Gaussian statistics, however, fail to capture several key features of the dynamics of biological processes (e.g., brain dynamics) such as abrupt state changes and exogenous processes that affect the states in a structured fashion. Although Gaussian mixture process noise models have been considered as an alternative to capture such effects, data-driven inference of their parameters is not well-established in the literature. The objective of this paper is to develop efficient algorithms for inferring the parameters of a general class of Gaussian mixture process noise models from noisy and limited observations, and to utilize them in extracting the neural dynamics that underlie auditory processing from magnetoencephalography (MEG) data in a cocktail party setting. We develop an algorithm based on Expectation-Maximization to estimate the process noise parameters from state-space observations. We apply our algorithm to simulated and experimentally-recorded MEG data from auditory experiments in the cocktail party paradigm to estimate the underlying dynamic Temporal Response Functions (TRFs). Our simulation results show that the richer representation of the process noise as a Gaussian mixture significantly improves state estimation and capturing the heterogeneity of the TRF dynamics. Application to MEG data reveals improvements over existing TRF estimation techniques, and provides a reliable alternative to current approaches for probing neural dynamics in a cocktail party scenario, as well as attention decoding in emerging applications such as smart hearing aids. Our proposed methodology provides a framework for efficient inference of Gaussian mixture process noise models, with application to a wide range of biological data with underlying heterogeneous and latent dynamics.

Indexed as

AlgorithmsAuditory PathwaysHumansMagnetoencephalographyModels, Neurological

Identifiers

PMID32813712
PMCPMC7485982

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.