Evidence map›Paper›PMID 32813063›Full record

ArticleApplied microbiology and biotechnology2020

Functional characterization of a novel thermophilic exo-arabinanase from Thermothielavioides terrestris.

Josman Velasco, Bianca Oliva, Aline Larissa Gonçalves, Awana Silva Lima, Gislene Ferreira, Bruno Alves França, Evandro José Mulinari, Thiago Augusto Gonçalves, Fábio Márcio Squina, Marco Antonio Seiki Kadowaki and 4 more

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Applied microbiology and biotechnology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
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  5. Secretome Analysis ofJournal of fungi (Basel, Switzerland) · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 1 country.

Josman Velasco *Department of Biotechnology, Lorena School of Engineering, University of São Paulo, Lorena, SP, Brazil.ORCID https://orcid.org/0000-0002-8935-6841
Bianca Oliva *Department of Biotechnology, Lorena School of Engineering, University of São Paulo, Lorena, SP, Brazil.ORCID https://orcid.org/0000-0001-5618-1865
Aline Larissa GonçalvesDepartment of Biotechnology, Lorena School of Engineering, University of São Paulo, Lorena, SP, Brazil.
Awana Silva LimaDepartment of Biotechnology, Lorena School of Engineering, University of São Paulo, Lorena, SP, Brazil.ORCID https://orcid.org/0000-0002-2067-0461
Gislene FerreiraDepartment of Biotechnology, Lorena School of Engineering, University of São Paulo, Lorena, SP, Brazil.
Bruno Alves FrançaDepartment of Biotechnology, Lorena School of Engineering, University of São Paulo, Lorena, SP, Brazil.
Evandro José MulinariDepartamento de Física e Ciências Aplicadas, Instituto de Física de São Carlos, Universidade de São Paulo, São Carlos, SP, Brazil.ORCID https://orcid.org/0000-0003-3479-7452
Thiago Augusto GonçalvesDepartamento de Bioquímica, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, SP, Brazil.ORCID https://orcid.org/0000-0001-6526-905X
Fábio Márcio SquinaPrograma de Processos Tecnológicos e Ambientais, Universidade de Sorocaba, Sorocaba, SP, Brazil.ORCID https://orcid.org/0000-0002-8154-7459
Marco Antonio Seiki KadowakiDepartamento de Física e Ciências Aplicadas, Instituto de Física de São Carlos, Universidade de São Paulo, São Carlos, SP, Brazil.ORCID https://orcid.org/0000-0003-0188-2079
Alfredo MaioranoInstituto de Pesquisas Tecnológicas do Estado de São Paulo, Diretoria de Operações e Negócios, Núcleo de Bionanomanufatura, São Paulo, SP, Brazil.ORCID https://orcid.org/0000-0001-6370-701X
Igor PolikarpovDepartamento de Física e Ciências Aplicadas, Instituto de Física de São Carlos, Universidade de São Paulo, São Carlos, SP, Brazil.ORCID https://orcid.org/0000-0001-9496-4174
Leandro Cristante de OliveiraDepartment of Physics - Institute of Biosciences, Humanities and Exact Sciences, São Paulo State University (UNESP), São José do Rio Preto, SP, Brazil.ORCID https://orcid.org/0000-0002-6932-6792
Fernando SegatoDepartment of Biotechnology, Lorena School of Engineering, University of São Paulo, Lorena, SP, Brazil. segato@usp.br.ORCID https://orcid.org/0000-0002-6715-9601
Universidade de São Paulo · BRUniversidade Federal de São Carlos · BRInstituto de Pesquisas Tecnológicas · BRUniversidade de Sorocaba · BRUniversidade Estadual de Campinas (UNICAMP) · BRUniversidade Estadual Paulista (Unesp) · BR

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico 2019/06663-8Conselho Nacional de Desenvolvimento Científico e Tecnológico 302627/2018-9Conselho Nacional de Desenvolvimento Científico e Tecnológico 443916/2014-4Fundação de Amparo à Pesquisa do Estado de São Paulo 2014/06923-6Fundação de Amparo à Pesquisa do Estado de São Paulo 2014/18714-2Fundação de Amparo à Pesquisa do Estado de São Paulo 2017/00525-0Fundação de Amparo à Pesquisa do Estado de São Paulo 2019/01165-0Fundação de Amparo à Pesquisa do Estado de São Paulo 2019/06663-8Fundação de Amparo à Pesquisa do Estado de São Paulo 2019/22284-7
6 · The paper itself

Abstract

Arabinanases from glycoside hydrolase family GH93 are enzymes with exo-activity that hydrolyze the α-1,5 bonds between arabinose residues present on arabinan. Currently, several initiatives aiming to use byproducts rich in arabinan such as pectin and sugar beet pulp as raw material to produce various compounds of interest are being developed. However, it is necessary to use robust enzymes that have an optimal performance under pH and temperature conditions used in the industrial processes. In this work, the first GH93 from the thermophilic fungus Thermothielavioides terrestris (Abn93T) was heterologously expressed in Aspergillus nidulans, purified and biochemically characterized. The enzyme is a thermophilic glycoprotein (optimum activity at 70 °C) with prolonged stability in acid pHs (4.0 to 6.5). The presence of glycosylation affected slightly the hydrolytic capacity of the enzyme, which was further increased by 34% in the presence of 1 mM CoCl

Indexed as

ArabinoseGlycoside HydrolasesMolecular Docking SimulationSordarialesSubstrate SpecificityArabinoseexo-alpha-L-arabinanaseGlycoside HydrolasesArabinanAspergillus nidulansExo-arabinanaseSugar beet pulpThermothielavioides terrestris

Identifiers

PMID32813063
OpenAlexW3071642376

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.