Evidence map›Paper›PMID 32808518›Full record

ArticleJournal of the American Chemical Society2020

Fluorous Soluble Cyanine Dyes for Visualizing Perfluorocarbons in Living Systems.

Irene Lim, Antoine Vian, Heidi L van de Wouw, Rachael A Day, Carlos Gomez, Yucen Liu, Arnold L Rheingold, Otger Campàs, Ellen M Sletten

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
8.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 66 citations in OpenAlex.

  1. Article
  2. Article
  3. Silicon Flavylium Polymethine Dyes for Shortwave Infrared Imaging.Journal of the American Chemical Society · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Non-Ionic Fluorosurfactants for Droplet-Based in vivo Applications.Angewandte Chemie (International ed. in English) · 2024
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Shortwave Infrared Fluorofluorophores for Multicolor In Vivo Imaging.Angewandte Chemie (International ed. in English) · 2023
    Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Irene LimDepartment of Chemistry and Biochemistry, University of California, Los Angeles, California 90095-1569, United States.
Antoine VianDepartment of Mechanical Engineering, University of California, Santa Barbara, California 93106-5200, United States.
Heidi L van de WouwDepartment of Chemistry and Biochemistry, University of California, Los Angeles, California 90095-1569, United States.
Rachael A DayDepartment of Chemistry and Biochemistry, University of California, Los Angeles, California 90095-1569, United States.ORCID 0000-0002-0018-7712
Carlos GomezDepartment of Mechanical Engineering, University of California, Santa Barbara, California 93106-5200, United States.
Yucen LiuDepartment of Mechanical Engineering, University of California, Santa Barbara, California 93106-5200, United States.
Arnold L RheingoldDepartment of Chemistry and Biochemistry, University of California, San Diego, California 92093-0505, United States.ORCID 0000-0003-4472-8127
Otger CampàsDepartment of Mechanical Engineering, University of California, Santa Barbara, California 93106-5200, United States.
Ellen M SlettenDepartment of Chemistry and Biochemistry, University of California, Los Angeles, California 90095-1569, United States.ORCID 0000-0002-0049-7278
University of California, Los Angeles · USUniversity of California, Santa Barbara · USUniversity of California San Diego · US

Funding

Robust microdroplet-based mechanical probes for wide-ranging mechanobiology applicationsR01GM135380 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI CAMPAS, OTGER, SLETTEN, ELLEN MAY · 2019 to 2022
$1.8M
NIGMS NIH HHS R01 GM135380
6 · The paper itself

Abstract

The bioorthogonal nature of perfluorocarbons provides a unique platform for introducing dynamic nano- and microdroplets into cells and organisms. To monitor the localization and deformation of the droplets, fluorous soluble fluorophores that are compatible with standard fluorescent protein markers and applicable to cells, tissues, and small organisms are necessary. Here, we introduce fluorous cyanine dyes that represent the most red-shifted fluorous soluble fluorophores to date. We study the effect of covalently appended fluorous tags on the cyanine scaffold and evaluate the changes in photophysical properties imparted by the fluorous phase. Ultimately, we showcase the utility of the fluorous soluble pentamethine cyanine dye for tracking the localization of perfluorocarbon nanoemulsions in macrophage cells and for measurements of mechanical forces in multicellular spheroids and zebrafish embryonic tissues. These studies demonstrate that the red-shifted cyanine dyes offer spectral flexibility in multiplexed imaging experiments and enhanced precision in force measurements.

Indexed as

AnimalsCarbocyaninesFluorescent DyesFluorocarbonsMicroscopy, FluorescenceMolecular StructureOptical ImagingSolubilityZebrafishCarbocyaninesFluorescent DyesFluorocarbons

Identifiers

PMID32808518
PMCPMC8366720
OpenAlexW3061106448

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.