Evidence map›Paper›PMID 32808463›Full record

ArticleFEBS open bio2020

Microarray-based transcriptional profiling of a mouse model of autoimmune hepatitis.

Yang Liu, Hao Chen, Jian-Heng Hao, Zhen-Cheng Li, Tiezheng Hou, Hui-Qin Hao

Open access · goldAbstract read
In one paragraph

Article in FEBS open bio, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Yang LiuCollege of Basic Medical Sciences, Shanxi University of Chinese Medicine, Jinzhong, China.ORCID 0000-0002-6627-5002
Hao ChenCollege of Basic Medical Sciences, Shanxi University of Chinese Medicine, Jinzhong, China.
Jian-Heng HaoCollege of Basic Medical Sciences, Shanxi University of Chinese Medicine, Jinzhong, China.
Zhen-Cheng LiCollege of Basic Medical Sciences, Shanxi University of Chinese Medicine, Jinzhong, China.
Tiezheng HouCollege of Basic Medical Sciences, Shanxi University of Chinese Medicine, Jinzhong, China.ORCID 0000-0003-0852-3386
Hui-Qin HaoCollege of Basic Medical Sciences, Shanxi University of Chinese Medicine, Jinzhong, China.
Shanxi University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Long noncoding RNAs (lncRNAs) are RNA molecules longer than 200 nucleotides that do not typically code for a protein. lncRNAs have regulatory roles in many physiological processes, and their dysregulation can contribute to cancer, cardiovascular and neurodegenerative diseases, as well as the onset of autoimmune diseases, including systemic lupus erythematosus and rheumatoid arthritis. However, lncRNA expression changes in autoimmune hepatitis (AIH), a form of inflammation induced by immunological tolerance disorders, are poorly understood. Here, for the first time to our knowledge, we used microarrays to profile 1161 differentially expressed lncRNAs (DELs; 608 up- and 553 down-regulated) and 11 512 differentially expressed mRNAs (DEMs; 5189 up- and 6323 down- regulated) in a concanavalin A-induced AIH mouse model. We used quantitative real-time PCR to confirm the expression of eight DELs and DEMs, and analyzed the coexpression relationship between them. Potential biological functions of screened DELs and DEMs were predicted with Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analysis. DEL-DEM interaction networks were also constructed. Our study revealed the roles of DELs and DEMs in the pathogenesis of AIH. We also provided potential candidate biomarkers that may have potential for future development into possible diagnostics or as a treatment for this disorder.

Indexed as

AnimalsConcanavalin ADisease Models, AnimalGene ExpressionGene Expression ProfilingGene Expression RegulationGene OntologyGene Regulatory NetworksHepatitis, AutoimmuneMaleMiceMice, Inbred C57BLMicroarray AnalysisReal-Time Polymerase Chain ReactionRNA, Long NoncodingRNA, MessengerConcanavalin ARNA, Long NoncodingRNA, Messengerautoimmune hepatitisconcanavalin AGene OntologyKEGGlncRNAmicroarray

Identifiers

PMID32808463
PMCPMC7530384
OpenAlexW3078291304

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.