Evidence map›Paper›PMID 32807951›Full record

ReviewNature plants2020

Genetic dissection of the auxin response network.

Alon Israeli, Jason W Reed, Naomi Ori

Abstract readReview
PubMed Publisher
In one paragraph

Review in Nature plants, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 1 pooled it
5.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 1 synthesis or guideline pooled it, 40 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Aux/IAAs: specificity and redundancy.Plant signaling & behavior · 2025
    Review
  4. Article
  5. Article
  6. Genome-wide characterization ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Polar auxin transport modulates early leaf flattening.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  13. Article
  14. Article
  15. Fine Mapping and Candidate Gene Prediction of Tuber Shape ControllingInternational journal of molecular sciences · 2022
    Article
  16. The Systems and Synthetic Biology of Auxin.Cold Spring Harbor perspectives in biology · 2022
    Review
  17. A Phloem-ExpressedFrontiers in plant science · 2022
    Article
  18. Auxin Does the SAMba: Auxin Signaling in the Shoot Apical Meristem.Cold Spring Harbor perspectives in biology · 2021
    Review
  19. Auxin-Regulated Lateral Root Organogenesis.Cold Spring Harbor perspectives in biology · 2021
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 3 countries.

Alon IsraeliThe Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, Hebrew University, Rehovot, Israel.ORCID http://orcid.org/0000-0002-3339-2042
Jason W ReedDepartment of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA. jreed@email.unc.edu.ORCID http://orcid.org/0000-0001-7508-9714
Naomi OriThe Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, Hebrew University, Rehovot, Israel. naomi.ori@mail.huji.ac.il.ORCID http://orcid.org/0000-0002-5129-5369
Hebrew University of Jerusalem · ILUniversity of North Carolina at Chapel Hill · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The expansion of gene families during evolution, which can generate functional overlap or specialization among their members, is a characteristic feature of signalling pathways in complex organisms. For example, families of transcriptional activators and repressors mediate responses to the plant hormone auxin. Although these regulators were identified more than 20 years ago, their overlapping functions and compensating negative feedbacks have hampered their functional analyses. Studies using loss-of-function approaches in basal land plants and gain-of-function approaches in angiosperms have in part overcome these issues but have still left an incomplete understanding. Here, we propose that renewed emphasis on genetic analysis of multiple mutants and species will shed light on the role of gene families in auxin response. Combining loss-of-function mutations in auxin-response activators and repressors can unravel complex outputs enabled by expanded gene families, such as fine-tuned developmental outcomes and robustness. Similar approaches and concepts may help to analyse other regulatory pathways whose components are also encoded by large gene families.

Indexed as

Gene Expression Regulation, PlantEmbryophytaGenes, PlantIndoleacetic AcidsPhylogenyPlant Growth RegulatorsPlant ProteinsSignal TransductionTranscription FactorsIndoleacetic AcidsPlant Growth RegulatorsPlant ProteinsTranscription Factors

Identifiers

PMID32807951
OpenAlexW3049738462

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.