Evidence map›Paper›PMID 32805724›Full record

ArticleAging2020

Transcriptome analysis of mouse aortae reveals multiple novel pathways regulated by aging.

Ping Gao, Pan Gao, Mihyun Choi, Kavya Chegireddy, Orazio J Slivano, Jinjing Zhao, Wei Zhang, Xiaochun Long

Open access · greenAbstract readComparative Study
In one paragraph

Article in Aging, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 19 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Review: Circadian clocks and rhythms in the vascular tree.Current opinion in pharmacology · 2021
    Review
  14. Aging Affects KFrontiers in physiology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Ping GaoDepartment of Molecular and Cellular Physiology, Albany Medical College, Albany, NY 12208, USA.
Pan GaoVascular Biology Center, Medical College of Georgia at Augusta University, Augusta, GA 30912, USA.
Mihyun ChoiDepartment of Molecular and Cellular Physiology, Albany Medical College, Albany, NY 12208, USA.
Kavya ChegireddySchool of Public Health, University at Albany, Albany, NY 12222, USA.
Orazio J SlivanoVascular Biology Center, Medical College of Georgia at Augusta University, Augusta, GA 30912, USA.
Jinjing ZhaoDepartment of Molecular and Cellular Physiology, Albany Medical College, Albany, NY 12208, USA.
Wei ZhangVascular Biology Center, Medical College of Georgia at Augusta University, Augusta, GA 30912, USA.
Xiaochun LongDepartment of Molecular and Cellular Physiology, Albany Medical College, Albany, NY 12208, USA.
Albany Medical Center Hospital · USAugusta University · USUniversity at Albany, State University of New York · US

Funding

Novel Role of MAPK14 in Regulation of VSMC Contractile PhenotypeR01HL122686 · NHLBI · AUGUSTA UNIVERSITY · PI LONG, XIAOCHUN · 2014 to 2022
$4.0M
Function and Regulation of TSPAN2 in Vascular DiseaseR01HL139794 · NHLBI · AUGUSTA UNIVERSITY · PI LONG, XIAOCHUN · 2019 to 2023
$2.7M
NHLBI NIH HHS R01 HL122686NHLBI NIH HHS R01 HL139794
6 · The paper itself

Abstract

Vascular aging has been documented as a vital process leading to arterial dysfunction and age-related cardiovascular and cerebrovascular diseases. However, our understanding of the molecular underpinnings of age-related phenotypes in the vascular system is incomplete. Here we performed bulk RNA sequencing in young and old mouse aortae to elucidate age-associated changes in the transcriptome. Results showed that the majority of upregulated pathways in aged aortae relate to immune response, including inflammation activation, apoptotic clearance, and phagocytosis. The top downregulated pathway in aged aortae was extracellular matrix organization. Additionally, protein folding control and stress response pathways were downregulated in the aged vessels, with an array of downregulated genes encoding heat shock proteins (HSPs). We also found that circadian core clock genes were differentially expressed in young versus old aortae. Finally, transcriptome analysis combined with protein expression examination and smooth muscle cell (SMC) lineage tracing revealed that SMCs in aged aortae retained the differentiated phenotype, with an insignificant decrease in SMC marker gene expression. Our results therefore unveiled critical pathways regulated by arterial aging in mice, which will provide important insight into strategies to defy vascular aging and age-associated vascular diseases.

Indexed as

Gene Expression ProfilingTranscriptomeAge FactorsAgingAnimalsAortaCircadian RhythmGene Expression RegulationGene Regulatory NetworksMaleMice, Inbred C57BLMice, TransgenicProtein Interaction MapsRNA-SeqSignal TransductionVascular Remodelingarterial agingcircadian clockprotein folding controltranscriptomevascular smooth muscle differentiation

Identifiers

PMID32805724
PMCPMC7467355
OpenAlexW3058298641

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.