ArticlePloS one2020
Transcriptome analysis of table grapes (Vitis vinifera L.) identified a gene network module associated with berry firmness.
Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
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Who cites it
14 citing papers in PubMed.
- Identifying Candidate Genes for Grape (Journal of agricultural and food chemistry · 2025Article
- VvFHY3 links auxin and endoplasmic reticulum stress to regulate grape anthocyanin biosynthesis at high temperatures.The Plant cell · 2024Article
- Inference of the genetic basis of fruit texture in highbush blueberries using genome-wide association analyses.Horticulture research · 2024Article
- Article
- Unlocking the Transcriptional Reprogramming Repertoire between Variety-Dependent Responses of Grapevine Berries to Infection byPlants (Basel, Switzerland) · 2024Article
- Insights into the cell-wall dynamics in grapevine berries during ripening and in response to biotic and abiotic stresses.Plant molecular biology · 2024Review
- Assessing the Effect of Cold Plasma on the Softening of Postharvest Blueberries through Reactive Oxygen Species Metabolism Using Transcriptomic Analysis.Foods (Basel, Switzerland) · 2024Article
- Berry texture QTL and candidate gene analysis in grape (Horticulture research · 2023Article
- Unraveling the pathways influencing the berry color and firmness of grapevine cv. Flame Seedless treated with bioregulators using biochemical and RNA-Seq analysis under semi-arid subtropics.Food chemistry. Molecular sciences · 2022Article
- Putrescine withJournal of food science and technology · 2022Article
- Transcriptome profiling of cashew apples (Anacardium occidentale) genotypes reveals specific genes linked to firmness and color during pseudofruit development.Plant molecular biology · 2022Article
- Towards Sensor-Based Phenotyping of Physical Barriers of Grapes to Improve Resilience toFrontiers in plant science · 2021Article
- Biosynthesis and Cellular Functions of Tartaric Acid in Grapevines.Frontiers in plant science · 2021Review
- Table Grapes during Postharvest Storage: A Review of the Mechanisms Implicated in the Beneficial Effects of Treatments Applied for Quality Retention.International journal of molecular sciences · 2020Review
Corrections and comments
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Authors and funding
7 authors.
Funding
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Abstract
Berry firmness is one of the main selection criteria for table grape breeding. However, the underlying genetic determinants and mechanisms involved in gene expression during berry development are still poorly understood. In this study, eighteen libraries sampled from Vitis vinifera L. cv. 'Red Globe' and 'Muscat Hamburg' at three developmental stages (preveraison, veraison and maturation) were analyzed by RNA sequencing (RNA-Seq). The firmness of 'Red Globe' was significantly higher than that of 'Muscat Hamburg' at the three developmental stages. In total, a set of 4,559 differentially expressed genes (DEGs) was identified between 'Red Globe' and 'Muscat Hamburg' in the preveraison (2,259), veraison (2030) and maturation stages (2682), including 302 transcription factors (TFs). Weighted gene coexpression network analysis (WGCNA) showed that 23 TFs were predicted to be highly correlated with fruit firmness and propectin content. In addition, the differential expression of the PE, PL, PG, β-GAL, GATL, WAK, XTH and EXP genes might be the reason for the differences in firmness between 'Red Globe' and 'Muscat Hamburg'. The results will provide new information for analysis of grape berry firmness and softening.
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