Evidence map›Paper›PMID 32804245›Full record

ArticleMicrobial ecology2021

The Genome-Wide Mutation Shows the Importance of Cell Wall Integrity in Growth of the Psychrophilic Yeast Metschnikowia australis W7-5 at Different Temperatures.

Xin Wei, Zhe Chi, Guang-Lei Liu, Zhong Hu, Zhen-Ming Chi

Abstract read
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In one paragraph

Article in Microbial ecology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. The Pathogenic YeastJournal of fungi (Basel, Switzerland) · 2023
    Review
  4. Article
  5. Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Xin WeiCollege of Marine Life Sciences, Ocean University of China, Yushan-Road, No. 5, Qingdao, China.
Zhe ChiCollege of Marine Life Sciences, Ocean University of China, Yushan-Road, No. 5, Qingdao, China.
Guang-Lei LiuCollege of Marine Life Sciences, Ocean University of China, Yushan-Road, No. 5, Qingdao, China.
Zhong HuDepartment of Biology, Shantou University, Shantou, 515063, China.
Zhen-Ming ChiCollege of Marine Life Sciences, Ocean University of China, Yushan-Road, No. 5, Qingdao, China. chi@ouc.edu.cn.
Ocean University of China · CNQingdao National Laboratory for Marine Science and Technology · CNShantou University · CN

Funding

Major Research Plan 31970058
6 · The paper itself

Abstract

In this study, it was found that a Cre/loxP system could be successfully used as a tool for editing the genome of the psychrophilic yeast Metschnikowia australis W7-5 isolated from Antarctica. The deletion and over-expression of the TPS1 gene for trehalose biosynthesis, the GSY gene for glycogen biosynthesis, and the GPD1 and GPP genes for glycerol biosynthesis had no influence on cell growth of the mutants and transformants compared to cell growth of their wild-type strain M. australis W7-5, indicating that trehalose, glycogen, and glycerol had no function in growth of the psychrophilic yeast at different temperatures. However, removal of the SLT2 gene encoding the mitogen-activated protein kinase in the cell wall integrity (CWI) signaling pathway and the SWI4 and SWI6 genes encoding the transcriptional activators Swi4/6 had the crucial influence on cell growth of the psychrophilic yeast at the low temperature, especially at 25 °C and expression of the genes related to cell wall and lipid biosynthesis. Therefore, the cell wall could play an important role in growth of the psychrophilic yeast at different temperatures and biosynthesis of cell wall was actively regulated by the CWI signaling pathway. This was the first time to show that the genome of the psychrophilic yeast was successfully edited and the molecular evidences were obtained to elucidate mechanisms of low temperature growth of the psychrophilic yeast from Antarctica.

Indexed as

AcclimatizationCell WallCold TemperatureGene EditingGene Expression Regulation, FungalGenome, FungalGlucosyltransferasesGlycerolGlycerol-3-Phosphate Dehydrogenase (NAD+)GlycogenIntegrasesMetschnikowiaMitogen-Activated Protein KinasesSignal TransductionTranscription FactorsTrehaloseCre recombinaseGlucosyltransferasesGlycerolGlycerol-3-Phosphate Dehydrogenase (NAD+)GlycogenIntegrasesMitogen-Activated Protein KinasesTranscription FactorsTrehalosetrehalose-6-phosphate synthaseCWI signaling pathwayM. australis W7-5Molecular mechanisms of cold adaptationThe Cre/loxP systemThe psychrophilic yeast

Identifiers

PMID32804245
OpenAlexW3073853682

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.