Evidence map›Paper›PMID 32803477›Full record

ArticlePlant molecular biology2020

Biochemical characterization of ClpB3, a chloroplastic disaggregase from Arabidopsis thaliana.

Ivana L Parcerisa, Germán L Rosano, Eduardo A Ceccarelli

Abstract read
PubMed Publisher
In one paragraph

Article in Plant molecular biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
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  8. Recruitment of an ancient branching program to suppress carpel development in maize flowers.Proceedings of the National Academy of Sciences of the United States of America · 2022
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  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Ivana L ParcerisaInstituto de Biología Molecular y Celular de Rosario (IBR), CONICET. Facultad de Ciencias Bioquímicas y Farmacéuticas, Universidad Nacional de Rosario, 2000, Rosario, Argentina.
Germán L RosanoInstituto de Biología Molecular y Celular de Rosario (IBR), CONICET. Facultad de Ciencias Bioquímicas y Farmacéuticas, Universidad Nacional de Rosario, 2000, Rosario, Argentina. rosano@ibr-conicet.gov.ar.ORCID http://orcid.org/0000-0002-8313-6813
Eduardo A CeccarelliInstituto de Biología Molecular y Celular de Rosario (IBR), CONICET. Facultad de Ciencias Bioquímicas y Farmacéuticas, Universidad Nacional de Rosario, 2000, Rosario, Argentina.ORCID http://orcid.org/0000-0001-5776-3306
National University of Rosario · AR

Funding

SYMPATHETIC REGULATION BY VENTRICULAR AFFERENTS IN HUMANF05TW004494 · FIC · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI JACOBSEN, TAGE N · 1991 to 1991
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Consejo Nacional de Investigaciones Científicas y Técnicas PIP020120100345Fondo para la Investigación Científica y Tecnológica PICT2015-2955Fondo para la Investigación Científica y Tecnológica PICT2018-04494Universidad Nacional de Rosario BIO497
6 · The paper itself

Abstract

key messageThe first biochemical characterization of a chloroplastic disaggregase is reported (Arabidopsis thaliana ClpB3). ClpB3 oligomerizes into active hexamers that resolubilize aggregated substrates using ATP and without the aid of partners. Disaggregases from the Hsp100/Clp family are a type of molecular chaperones involved in disassembling protein aggregates. Plant cells are uniquely endowed with ClpB proteins in the cytosol, mitochondria and chloroplasts. Chloroplastic ClpB proteins have been implicated in key processes like the unfolded protein response; however, they have not been studied in detail. In this study, we explored the biochemical properties of a chloroplastic ClpB disaggregase, in particular, ClpB3 from A. thaliana. ClpB3 was produced recombinantly in Escherichia coli and affinity-purified to near homogeneity. ClpB3 forms a hexameric complex in the presence of MgATP and displays intrinsic ATPase activity. We demonstrate that ClpB3 has ATPase activity in a wide range of pH and temperature values and is particularly resistant to heat. ClpB3 specifically targets unstructured polypeptides and mediates the reactivation of heat-denatured model substrates without the aid of the Hsp70 system. Overall, this work represents the first in-depth biochemical description of a ClpB protein from plants and strongly supports its role as the putative disaggregase chaperone in chloroplasts.

Indexed as

Adenosine TriphosphateArabidopsis ProteinsChloroplastsHSP70 Heat-Shock ProteinsIntrinsically Disordered ProteinsKineticsMagnesiumMolecular ChaperonesProtein DenaturationTemperatureAdenosine TriphosphateAPG6 protein, ArabidopsisArabidopsis ProteinsHSP70 Heat-Shock ProteinsIntrinsically Disordered ProteinsMagnesiumMolecular ChaperonesArabidopsis thalianaATPaseChaperoneChloroplastsClpBDisaggregase

Identifiers

PMID32803477
OpenAlexW3049139155

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.