Evidence map›Paper›PMID 32801587›Full record

ArticleJournal of forensic dental sciences

Determination of epigenetic age through DNA methylation of NPTX2 gene using buccal scrapes: A pilot study.

Nawal Khan, Radhika M Bavle, Soumya Makarla, Paremala Konda, S R Amulya, Sreenitha S Hosthor

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Article in Journal of forensic dental sciences. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper, 1 of them a synthesis that pooled it.

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1citing papers in PubMed, 1 pooled it
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Nawal KhanDepartment of Oral and Maxillofacial Pathology, Krishnadevaraya College of Dental Sciences, Bengaluru, Karnataka, India.
Radhika M BavleDepartment of Oral and Maxillofacial Pathology, Krishnadevaraya College of Dental Sciences, Bengaluru, Karnataka, India.
Soumya MakarlaDepartment of Oral and Maxillofacial Pathology, Krishnadevaraya College of Dental Sciences, Bengaluru, Karnataka, India.
Paremala KondaDepartment of Oral Pathology, Government Dental College and Hospital, Hyderabad, Telangana, India.
S R AmulyaDepartment of Oral and Maxillofacial Pathology, Krishnadevaraya College of Dental Sciences, Bengaluru, Karnataka, India.
Sreenitha S HosthorDepartment of Oral and Maxillofacial Pathology, Krishnadevaraya College of Dental Sciences, Bengaluru, Karnataka, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

contextDNA methylation (DNAm) age can be used to evaluate the chronological age of individuals often called "epigenetic age." In this study, buccal scrape samples were used for the determination of epigenetic age.

aimsTo examine if epigenetic age could be determined using neuronal pentraxin 2 (NPTX2) gene in buccal cells. SETTING AND

designThis cohort study was designed to validate the use of buccal cells for epigenetic age estimation. Sanger sequencing was used to determine the genetic sequence of the gene of interest postamplification. Nucleotide base sequence for NPTX2 gene was obtained for each case using this protocol. SUBJECTS AND

methodsThe study was conducted on buccal scrapes obtained from 26 subjects of both genders, whose age varied from 1 to 65 years. The samples, collected by wooden spatulas, were placed in cell suspension buffer and stored at 4°C until transported to the laboratory.

resultsMethylation levels of 5'-C-phosphate-G-3' located in the gene NPTX2 of 26 subjects were studied and analyzed by bisulfate sequencing. The percentage of methylation in this study falls in the range between 15% and 51%.

conclusionIn this study, a sufficient amount of gDNA was retrieved from the buccal cells, thus confirming that buccal scrape was a feasible technique to obtain ample DNA. This study also showed that DNAm-polymerase chain reaction method was a feasible method for the evaluation of methylation pattern of NPTX2 gene.

Indexed as

Age determinationbuccal scrapeDNA methylationepigenomic ageforensic science

Identifiers

PMID32801587
PMCPMC7398359

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